Gene: Solyc02g030490.2
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc02g030490.2
- Transcript Identifier Solyc02g030490.2.1
- Gene Type Coding gene
- Location SL4.0ch02 : 24819271-24820697 : positive
Gene Family Information
- ID HOM05M000706
- #Genes/#Species 436/53
- Phylogenetic origin
- ID ORTHO05M000567
- #Genes/#Species 435/53
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Solyc02g030490.2.1
- uniprot A0A3Q7EWH1
Descriptions
- Description Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein (AHRD V3.3 *-* F4K1Y4_ARATH)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | AT5G60980 |
| GO:0090332 | ISO | PLAZA Integrative Orthology | stomatal closure | AT5G48650 |
| GO:1900425 | ISO | PLAZA Integrative Orthology | negative regulation of defense response to bacterium | AT5G48650 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | GOA Database | RNA binding | |
| GO:0003729 | IBA | GOA Database | mRNA binding | |
| GO:0003676 | ISO | PLAZA Homology (enrichment) | nucleic acid binding | HOM05M000706 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G60980 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | IBA | GOA Database | cytosol | |
| GO:1990904 | IBA | GOA Database | ribonucleoprotein complex | |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G60980 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT3G07250 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT5G60980 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.8.1 | RNA processing.mRNA sequestration.mRNA endoribonuclease (G3BP) |