Gene: Solyc01g096870.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g096870.4
  • Transcript Identifier Solyc01g096870.4.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 80124905-80130591 : positive

Gene Family Information

  • ID HOM05M001191
  • #Genes/#Species 278/53
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g096870.4.1
  • uniprot A0A3Q7EM55

Descriptions

  • Description Proline-tRNA ligase-like protein (AHRD V3.3 *** A0A2K3PF09_TRIPR)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006433
IBA
IEA
GOA Databaseprolyl-tRNA aminoacylation
GO:0006433
IEA
InterProprolyl-tRNA aminoacylation
GO:0048481
ISO
PLAZA Integrative Orthologyplant ovule development AT5G52520
GO:0009553
ISO
PLAZA Integrative Orthologyembryo sac development AT5G52520
GO:0048316
ISO
PLAZA Integrative Orthologyseed development AT5G52520
GO:0010109
ISO
PLAZA Integrative Orthologyregulation of photosynthesis AT5G52520
GO:0006418
IEA
GOA DatabasetRNA aminoacylation for protein translation
GO:0006418
IEA
InterProtRNA aminoacylation for protein translation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004827
IBA
IEA
GOA Databaseproline-tRNA ligase activity
GO:0004827
IEA
InterProproline-tRNA ligase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000166
IEA
InterPronucleotide binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0004812
IEA
GOA Databaseaminoacyl-tRNA ligase activity
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity
GO:0016874
IEA
GOA Databaseligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G52520
GO:0005737
IBA
IEA
GOA Databasecytoplasm
GO:0005737
IEA
InterProcytoplasm
GO:0005739
IBA
GOA Databasemitochondrion
GO:0009570
IBA
GOA Databasechloroplast stroma
GO:0017101
IBA
GOA Databaseaminoacyl-tRNA synthetase multienzyme complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016061 Proline-tRNA ligase, class II, C-terminal
IPR002316 Proline-tRNA ligase, class IIa
IPR017449 Prolyl-tRNA synthetase, class II
IPR036621 Anticodon-binding domain superfamily
IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)
IPR004499 Proline-tRNA ligase, class IIa, archaeal-type
IPR004154 Anticodon-binding
IPR033721 Prolyl-tRNA synthetase, catalytic domain
Mapman id Description
17.2.17 Protein biosynthesis.aminoacyl-tRNA synthetase activities.proline-tRNA ligase