Gene: Solyc01g068390.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g068390.3
  • Transcript Identifier Solyc01g068390.3.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 70392148-70396950 : negative

Gene Family Information

  • ID HOM05M001841
  • #Genes/#Species 190/53
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g068390.3.1
  • uniprot A0A3Q7EGU6

Descriptions

  • Description Zinc ion binding/nucleic acid binding protein (AHRD V3.3 *-* F4IK69_ARATH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0072344
IEA
GOA Databaserescue of stalled ribosome
GO:0072344
IEA
InterProrescue of stalled ribosome
GO:0016311
IEA
GOA Databasedephosphorylation
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0034968
IEA
GOA Databasehistone lysine methylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0061630
IEA
GOA Databaseubiquitin protein ligase activity
GO:0061630
IEA
InterProubiquitin protein ligase activity
GO:0003993
IEA
GOA Databaseacid phosphatase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0018024
IEA
GOA Databasehistone-lysine N-methyltransferase activity
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT3G62240
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G62240

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013087 Zinc finger C2H2-type
IPR041888 ZN598/Hel2, RING finger
IPR044288 E3 ubiquitin-protein ligase ZNF598/Hel2
Mapman id Description
15.5.15 RNA biosynthesis.transcriptional regulation.transcription factor (C2H2-ZF)