Gene: Os11g0579800

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os11g0579800
  • Transcript Identifier Os11t0579800-01
  • Gene Type Coding gene
  • Location chr11 : 21890500-21892136 : positive

Gene Family Information

Gene Duplication Information

Labels

Identifiers

  • tid Os11t0579800-01
  • MSU-ID LOC_Os11g37080.1
  • uniprot Q2R242

Descriptions

  • Description Gar1 protein RNA-binding region family protein.

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001522
IEA
GOA Databasepseudouridine synthesis
GO:0001522
IEA
InterPropseudouridine synthesis
GO:0042254
IEA
GOA Databaseribosome biogenesis
GO:0042254
IEA
InterProribosome biogenesis
GO:0006364
IEA
GOA DatabaserRNA processing
GO:0000454
IBA
GOA DatabasesnoRNA guided rRNA pseudouridine synthesis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0034513
IBA
GOA Databasebox H/ACA snoRNA binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G03920

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
IEA
GOA Databasenucleolus
GO:0005634
IEA
GOA Databasenucleus
GO:0031429
IBA
GOA Databasebox H/ACA snoRNP complex
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane AT5G18180

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR038664 H/ACA RNP complex subunit Gar1/Naf1, Cbf5-binding domain
IPR009000 Translation protein, beta-barrel domain superfamily
IPR007504 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1
Mapman id Description
17.1.1.2.2.1.2 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.pseudouridylation.H/ACA small nucleolar ribonucleoprotein (snoRNP) rRNA pseudouridylation complex.core component Gar1