Gene: Os11g0572100

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os11g0572100
  • Transcript Identifier Os11t0572100-01
  • Gene Type Coding gene
  • Location chr11 : 21443454-21452623 : positive

Gene Family Information

Gene Duplication Information

Labels

Identifiers

  • tid Os11t0572100-01
  • MSU-ID LOC_Os11g36390.1
  • symbol-oryzabase OsRFC1
  • symbol-CGSNL RFC1
  • name-CGSNL REPLICATION FACTOR C SUBUNIT 1
  • uniprot Q2R2B4

Descriptions

  • Description Similar to DNA ligase (EC 6.5.1.2).
  • Description Similar to Replication factor C 110 kDa subunit.
  • name-oryzabase replication factor C1
  • name-oryzabase replication factor C subunit 1

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000712
IEA
GOA Databaseresolution of meiotic recombination intermediates
GO:0000003
IEA
GOA Databasereproduction
GO:0031935
IEA
GOA Databaseregulation of chromatin silencing
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0009737
IEA
GOA Databaseresponse to abscisic acid
GO:0051570
IEA
GOA Databaseregulation of histone H3-K9 methylation
GO:0051321
IEA
GOA Databasemeiotic cell cycle
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006281
IEA
InterProDNA repair
GO:0006260
IEA
GOA DatabaseDNA replication
GO:0006260
IEA
InterProDNA replication

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IBA
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0003689
IEA
GOA DatabaseDNA clamp loader activity
GO:0003689
IEA
InterProDNA clamp loader activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0016887
IEA
InterProATP hydrolysis activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
IEA
GOA Databasenucleus
GO:0005663
IEA
GOA DatabaseDNA replication factor C complex
GO:0005663
IEA
InterProDNA replication factor C complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
IPR012178 Replication factor C subunit 1
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR036420 BRCT domain superfamily
IPR003959 ATPase, AAA-type, core
IPR013725 DNA replication factor RFC1, C-terminal
IPR001357 BRCT domain
IPR003593 AAA+ ATPase domain
Mapman id Description
13.2.3.4.2.1 Cell cycle organisation.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.component RFC1