Gene: Os11g0153700

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os11g0153700
  • Transcript Identifier Os11t0153700-01
  • Gene Type Coding gene
  • Location chr11 : 2517493-2521632 : positive

Gene Family Information

  • ID HOM05M000789
  • #Genes/#Species 403/53
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os11t0153700-01
  • MSU-ID LOC_Os11g05556.2
  • MSU-ID LOC_Os11g05556.1
  • symbol-oryzabase OscpSRP54b
  • symbol-oryzabase cpSRP54b
  • symbol-CGSNL CPSRP54B
  • name-CGSNL CHLOROPLAST SIGNAL RECOGNITION PARTICLE 54B
  • uniprot Q53QG1

Descriptions

  • Description Similar to Signal recognition particle 54 kDa protein, chloroplast precursor (SRP54) (54 chloroplast protein) (54CP) (FFC).
  • name-oryzabase chloroplast signal recognition particle 54b

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070208
ISO
PLAZA Integrative Orthologyprotein heterotrimerization AT5G03940
GO:0045038
ISO
PLAZA Integrative Orthologyprotein import into chloroplast thylakoid membrane AT5G03940
GO:0006614
IEA
GOA DatabaseSRP-dependent cotranslational protein targeting to membrane
GO:0006614
IEA
InterProSRP-dependent cotranslational protein targeting to membrane

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008312
IEA
GOA Database7S RNA binding
GO:0008312
IEA
InterPro7S RNA binding
GO:0005048
ISO
PLAZA Integrative Orthologysignal sequence binding AT5G03940
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G03940
GO:0019904
ISO
PLAZA Integrative Orthologyprotein domain specific binding AT5G03940
GO:0003924
IEA
GOA DatabaseGTPase activity
GO:0003924
IEA
InterProGTPase activity
GO:0005525
IEA
GOA DatabaseGTP binding
GO:0005525
IEA
InterProGTP binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0003723
IEA
GOA DatabaseRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032991
ISO
PLAZA Integrative Orthologyprotein-containing complex AT5G03940
GO:0080085
ISO
PLAZA Integrative Orthologysignal recognition particle, chloroplast targeting AT5G03940
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G03940
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT5G03940
GO:0048500
IEA
GOA Databasesignal recognition particle
GO:0048500
IEA
InterProsignal recognition particle
GO:0005786
IEA
GOA Databasesignal recognition particle, endoplasmic reticulum targeting

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily
IPR013822 Signal recognition particle SRP54, helical bundle
IPR004780 Signal recognition particle protein
IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily
IPR003593 AAA+ ATPase domain
IPR004125 Signal recognition particle, SRP54 subunit, M-domain
IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain
IPR022941 Signal recognition particle, SRP54 subunit
Mapman id Description
23.1.7.3.2 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.SRP43-SRP54 transit complex.component cpSRP54