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Monocots PLAZA 5.0
Data
Overview
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Analyze
Gene families
Expansion plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Pan-Genome
Pan and core families
Synteny scores overview
Synteny score chart
HOT-Region
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/Interpro description
Gene family
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V3.Lp_scaffold_8160G2
Gene toolbox
View
Sequences
BLAST Hits
Orthologs
Colinear Genes Pairs
Genome Browser
Homology related tools
Local Gene Organization
Multiple Sequence Alignment
Phylogenetic Tree
Similarity Heatmap
Create
Custom Phylogenetic Tree
Sequences
Gene information
Gene
V3.Lp_scaffold_8160G2
Chromosome
Lp_scaffold_8160
Start
9206
Stop
10481
Strand
+
Sequence content
DNA Sequences
Protein Sequences
Parameters
Strand
positive
negative
Remove overlap
(with previous/next gene)
Exons (CDS)
Exons (UTR)
Intron
Upstream
None
1kb
2kb
Downstream
None
1kb
2kb
Output
Text
Fasta