Anchorpoints

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Asparagus officinalisevm.TU.AsparagusV1_07.374.V1.1AsparagusV1_07-View
Arabidopsis thalianaAT5G60170RNA binding (RRM/RBD/RNP motifs) family protein RNA binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%2C RNA recognition%2C domain 1 (InterPro:IPR003954)%3B BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G45630.1)%3B Has 1342 Blast hits to 828 proteins in 247 species: Archae - 0%3B Bacteria - 318%3B Metazoa - 242%3B Fungi - 228%3B Plants - 152%3B Viruses - 0%3B Other Eukaryotes - 402 (source: NCBI BLink). RNA binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%2C RNA recognition%2C domain 1 (InterPro:IPR003954)%3B BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G45630.1).Chr5+View
Arabidopsis thalianaAT2G28540RNA binding (RRM/RBD/RNP motifs) family protein RNA binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: nucleotide binding%2C zinc ion binding%2C nucleic acid binding%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Zinc finger%2C RING-type (InterPro:IPR001841)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%2C RNA recognition%2C domain 1 (InterPro:IPR003954)%3B BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G45630.1)%3B Has 925 Blast hits to 706 proteins in 218 species: Archae - 0%3B Bacteria - 26%3B Metazoa - 245%3B Fungi - 180%3B Plants - 141%3B Viruses - 0%3B Other Eukaryotes - 333 (source: NCBI BLink). RNA binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: nucleotide binding%2C zinc ion binding%2C nucleic acid binding%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Zinc finger%2C RING-type (InterPro:IPR001841)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G45630.1)%3B Has 940 Blast hits to 717 proteins in 219 species: Archae - 0%3B Bacteria - 26%3B Metazoa - 247%3B Fungi - 180%3B Plants - 143%3B Viruses - 0%3B Other Eukaryotes - 344 (source: NCBI BLink).Chr2+View
Ceratophyllum demersumCDE02G26221-View
Ceratophyllum demersumCDE09G07977+View
Glycine maxGlyma.15G044500K10643 - CCR4-NOT transcription complex subunit 4 (CNOT4, NOT4, MOT2)Gm15-View
Glycine maxGlyma.10G048700K10643 - CCR4-NOT transcription complex subunit 4 (CNOT4, NOT4, MOT2)Gm10-View
Glycine maxGlyma.13G136500K10643 - CCR4-NOT transcription complex subunit 4 (CNOT4, NOT4, MOT2)Gm13-View
Glycine maxGlyma.12G073200K10643 - CCR4-NOT transcription complex subunit 4 (CNOT4, NOT4, MOT2)Gm12+View
Glycine maxGlyma.11G150034K10643 - CCR4-NOT transcription complex subunit 4 (CNOT4, NOT4, MOT2)Gm11-View
Glycine maxGlyma.13G329600K10643 - CCR4-NOT transcription complex subunit 4 (CNOT4, NOT4, MOT2)Gm13+View
Populus trichocarpaPotri.006G132300K10643 - CCR4-NOT transcription complex subunit 4 (CNOT4, NOT4, MOT2)Chr06+View
Populus trichocarpaPotri.016G084700K10643 - CCR4-NOT transcription complex subunit 4 (CNOT4, NOT4, MOT2)Chr16-View