Anchorpoints
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Asparagus officinalis | evm.TU.AsparagusV1_07.374.V1.1 | AsparagusV1_07 | - | View | |
Arabidopsis thaliana | AT5G60170 | RNA binding (RRM/RBD/RNP motifs) family protein RNA binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%2C RNA recognition%2C domain 1 (InterPro:IPR003954)%3B BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G45630.1)%3B Has 1342 Blast hits to 828 proteins in 247 species: Archae - 0%3B Bacteria - 318%3B Metazoa - 242%3B Fungi - 228%3B Plants - 152%3B Viruses - 0%3B Other Eukaryotes - 402 (source: NCBI BLink). RNA binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%2C RNA recognition%2C domain 1 (InterPro:IPR003954)%3B BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G45630.1). | Chr5 | + | View |
Arabidopsis thaliana | AT2G28540 | RNA binding (RRM/RBD/RNP motifs) family protein RNA binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: nucleotide binding%2C zinc ion binding%2C nucleic acid binding%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Zinc finger%2C RING-type (InterPro:IPR001841)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%2C RNA recognition%2C domain 1 (InterPro:IPR003954)%3B BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G45630.1)%3B Has 925 Blast hits to 706 proteins in 218 species: Archae - 0%3B Bacteria - 26%3B Metazoa - 245%3B Fungi - 180%3B Plants - 141%3B Viruses - 0%3B Other Eukaryotes - 333 (source: NCBI BLink). RNA binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: nucleotide binding%2C zinc ion binding%2C nucleic acid binding%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Zinc finger%2C RING-type (InterPro:IPR001841)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G45630.1)%3B Has 940 Blast hits to 717 proteins in 219 species: Archae - 0%3B Bacteria - 26%3B Metazoa - 247%3B Fungi - 180%3B Plants - 143%3B Viruses - 0%3B Other Eukaryotes - 344 (source: NCBI BLink). | Chr2 | + | View |
Ceratophyllum demersum | CDE02G2622 | 1 | - | View | |
Ceratophyllum demersum | CDE09G0797 | 7 | + | View | |
Glycine max | Glyma.15G044500 | K10643 - CCR4-NOT transcription complex subunit 4 (CNOT4, NOT4, MOT2) | Gm15 | - | View |
Glycine max | Glyma.10G048700 | K10643 - CCR4-NOT transcription complex subunit 4 (CNOT4, NOT4, MOT2) | Gm10 | - | View |
Glycine max | Glyma.13G136500 | K10643 - CCR4-NOT transcription complex subunit 4 (CNOT4, NOT4, MOT2) | Gm13 | - | View |
Glycine max | Glyma.12G073200 | K10643 - CCR4-NOT transcription complex subunit 4 (CNOT4, NOT4, MOT2) | Gm12 | + | View |
Glycine max | Glyma.11G150034 | K10643 - CCR4-NOT transcription complex subunit 4 (CNOT4, NOT4, MOT2) | Gm11 | - | View |
Glycine max | Glyma.13G329600 | K10643 - CCR4-NOT transcription complex subunit 4 (CNOT4, NOT4, MOT2) | Gm13 | + | View |
Populus trichocarpa | Potri.006G132300 | K10643 - CCR4-NOT transcription complex subunit 4 (CNOT4, NOT4, MOT2) | Chr06 | + | View |
Populus trichocarpa | Potri.016G084700 | K10643 - CCR4-NOT transcription complex subunit 4 (CNOT4, NOT4, MOT2) | Chr16 | - | View |