Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Solyc01g105610.1RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1LC40_ARTAN)SL4.0ch01+View
Solyc04g014220.1RING/U-box superfamily protein (AHRD V3.3 *-* F4JJ02_ARATH)SL4.0ch04+View
Solyc04g074790.3RING/U-box superfamily protein (AHRD V3.3 *-* F4JJ02_ARATH)SL4.0ch04+View


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Ananas comosusAco002755RING finger protein 126-ALG06-View
Ananas comosusAco001256RING-H2 finger protein 2BLG02-View
Ananas comosusAco004056RING-H2 finger protein 2BLG15+View
Ananas comosusAco004343RING-H2 finger protein 2BLG05-View
Asparagus officinalisevm.TU.AsparagusV1_03.333.V1.1AsparagusV1_03+View
Aegilops tauschiiAET5Gv205844005D-View
Arabidopsis thalianaAT5G10380RING/U-box superfamily protein Encodes a RING finger domain protein with E3 ligase activity that is localized to the lipid rafts of the plasma membrane. Expression is increased in response to fungal pathogen. May be involved in regulation of programmed cell death by facilitating degredation of regulation of PDC activators. RING1%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G72220.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).Chr5+View
Arabidopsis thalianaAT4G40070RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 9 plant structures%3B EXPRESSED DURING: 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G05200.1)%3B Has 9770 Blast hits to 9744 proteins in 297 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2524%3B Fungi - 782%3B Plants - 4953%3B Viruses - 74%3B Other Eukaryotes - 1437 (source: NCBI BLink).Chr4+View
Arabidopsis thalianaAT4G38140RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B LOCATED IN: anchored to membrane%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G18650.1)%3B Has 7548 Blast hits to 7531 proteins in 260 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1845%3B Fungi - 600%3B Plants - 4291%3B Viruses - 10%3B Other Eukaryotes - 802 (source: NCBI BLink).Chr4-View
Brachypodium distachyonBradi3g38493K10664 - E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:6.3.2.19] (ATL6S)Bd3-View
Calamus simplicifoliusCALSI_Maker00034014scaffold439+View
Ceratophyllum demersumCDE06G25804+View
Cenchrus purpureusGWHGAORA007829GWHAORA00000002+View
Cenchrus purpureusGWHGAORA028375GWHAORA00000006+View
Cenchrus purpureusGWHGAORA007864GWHAORA00000002-View
Cenchrus purpureusGWHGAORA047929GWHAORA00000010-View
Dioscorea dumetorumDDU440G0029contig580-View
Digitaria exilisDexi4B01G0008660Similar to ATL6: E3 ubiquitin-protein ligase ATL6 (Arabidopsis thaliana OX%3D3702)Dexi_CM05836_chr04B-View
Eragrostis curvulaEJB05_43405hypothetical protein3-View
Eragrostis curvulaEJB05_48644hypothetical proteinContig50+View
Elaeis guineensisp5.00_sc00001_p0941EG5.1_Chr3-View
Elaeis guineensisp5.00_sc00049_p0129EG5.1_Chr15-View
Elaeis guineensisp5.00_sc00068_p0075p5_sc00068+View
Elaeis guineensisp5.00_sc00031_p0070EG5.1_Chr7-View
Glycine maxGlyma.05G175400PTHR14155//PTHR14155:SF94 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL33-RELATEDGm05-View
Glycine maxGlyma.11G242500PTHR14155//PTHR14155:SF87 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDGm11+View
Glycine maxGlyma.18G014250PTHR14155//PTHR14155:SF95 - RING FINGER DOMAIN-CONTAINING // E3 UBIQUITIN-PROTEIN LIGASE ATL42-RELATEDGm18-View
Glycine maxGlyma.04G091400PTHR14155:SF78 - RING-H2 FINGER PROTEIN ATL43Gm04-View
Glycine maxGlyma.14G177900PTHR14155//PTHR14155:SF174 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDGm14+View
Glycine maxGlyma.15G056000PTHR14155//PTHR14155:SF101 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDGm15+View
Glycine maxGlyma.02G210400PTHR14155//PTHR14155:SF174 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDGm02+View
Hordeum vulgareHorvu_MOREX_5H01G406900chr5H-View
Lolium perenneV3.Lp_chr5_0G14710Lp_chr5_0-View
Musa acuminataMa01_g14800E3 ubiquitin-protein ligase ATL31-likechr01-View
Musa acuminataMa06_g11770RING-H2 finger protein ATL52-likechr06-View
Musa acuminataMa07_g12630E3 ubiquitin-protein ligase ATL31chr07+View
Musa acuminataMa10_g30240RING-H2 finger protein ATL54-likechr10-View
Musa acuminataMa10_g24780E3 ubiquitin-protein ligase ATL6-likechr10+View
Musa acuminataMa03_g06620E3 ubiquitin-protein ligase ATL31-likechr03+View
Magnolia biondiiMBI02_g20472_MAGBIOAED:0.22Chr02+View
Magnolia biondiiMBI06_g03313_MAGBIOAED:0.03Chr06+View
Miscanthus sinensisMisin02G450300Chr02+View
Miscanthus sinensisMisin04G214400Chr04-View
Miscanthus sinensisMisin03G196200Chr03+View
Oryza altaGWHGAZTO020901GWHAZTO00000002+View
Oryza altaGWHGAZTO022508GWHAZTO00000003-View
Oryza altaGWHGAZTO051860GWHAZTO00000009-View
Oryza brachyanthaOB09G19950Uncharacterized protein9-View
Oryza sativa ssp. japonicaOs03g0391100Zinc finger, RING-type domain containing protein.chr03+View
Oryza sativa ssp. indicaOsR498G0204812100.01protein_codingChr2+View
Oryza sativa ssp. indicaOsR498G0611865600.01protein_codingChr6-View
Oryza sativa ssp. indicaOsR498G0917651200.01protein_codingChr9-View
Oryza sativa KitaakeOsKitaake03g068700Chr3-View
Oryza sativa KitaakeOsKitaake03g203500Chr3+View
Oryza sativa KitaakeOsKitaake02g340600Chr2+View
Oropetium thomaeumOt_Chr4_g00324Chromosome_4+View
Oropetium thomaeumOt_Chr2_g05624Chromosome_2+View
Oropetium thomaeumOt_Chr9_g20375Chromosome_9-View
Phyllostachys edulisPH02Gene01270hic_scaffold_18+View
Phyllostachys edulisPH02Gene10751hic_scaffold_17-View
Phyllostachys edulisPH02Gene05926hic_scaffold_3+View
Panicum halliiPahal.6G239700K10664 - E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:6.3.2.19] (ATL6S)Chr06-View
Panicum halliiPahal.2G296700K10664 - E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:6.3.2.19] (ATL6S)Chr02-View
Panicum halliiPahal.9G442300K10664 - E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:6.3.2.19] (ATL6S)Chr09-View
Populus trichocarpaPotri.002G101800PTHR14155//PTHR14155:SF174 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDChr02+View
Populus trichocarpaPotri.017G049300PTHR14155//PTHR14155:SF101 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDChr17-View
Populus trichocarpaPotri.007G111900PTHR14155//PTHR14155:SF94 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL33-RELATEDChr07+View
Populus trichocarpaPotri.005G160900K10664 - E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:6.3.2.19] (ATL6S)Chr05-View
Populus trichocarpaPotri.005G071300PTHR14155//PTHR14155:SF94 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL33-RELATEDChr05-View
Populus trichocarpaPotri.007G097500PTHR14155//PTHR14155:SF94 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL33-RELATEDChr07+View
Sorghum bicolorSobic.001G350100similar to Putative RING-H2 zinc finger proteinChr01-View
Sorghum bicolorSobic.002G232800similar to RING-H2 zinc finger protein ATL6-likeChr02-View
Setaria italicaSeita.9G378400scaffold_9-View
Setaria italicaSeita.2G237900scaffold_2+View
Setaria italicaSeita.4G088200scaffold_4-View
Spirodela polyrhizaSpipo20G0021900Ring finger protein, putativepseudo20+View
Saccharum spontaneumSspon.02G0037290-2DChr2D+View
Setaria viridisSevir.2G248400PTHR14155//PTHR14155:SF101 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDChr_02+View
Setaria viridisSevir.4G087400K10664 - E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:6.3.2.19] (ATL6S)Chr_04-View
Setaria viridisSevir.9G383600K10664 - E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:6.3.2.19] (ATL6S)Chr_09-View
Setaria viridisSevir.6G192800K10664 - E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:6.3.2.19] (ATL6S)Chr_06-View
Setaria viridisSevir.9G516200K10664 - E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:6.3.2.19] (ATL6S)Chr_09+View
Triticum aestivumTraesCS6B03G0975500TraesCS6B01G346000Chr6B-View
Triticum aestivumTraesCS5B03G0637600TraesCS5B01G245800Chr5B-View
Triticum aestivumTraesCS5D03G0586600TraesCS5D01G254900Chr5D-View
Triticum dicoccoidesTRIDC4AG0564204A+View
Triticum dicoccoidesTRIDC4BG0518504B-View
Triticum dicoccoidesTRIDC5BG0409405B-View
Triticum turgidumTRITD5Bv1G141330Ring finger protein, putativechr5B-View
Zoysia japonica ssp. nagirizakiZjn_sc00002.1.g12210.1.am.mkZjn_sc00002.1+View
Zea mays B73Zm00001eb315600Zm00001e034421 E3 ubiquitin-protein ligase ATL67-View
Zea mays B73Zm00001eb006670Zm00001e000653 E3 ubiquitin-protein ligase ATL61-View
Zea mays B73Zm00001eb101180Zm00001e009988 E3 ubiquitin-protein ligase ATL62-View
Zostera marinaZosma01g09020PTHR14155:SF94 - RING-H2 FINGER PROTEIN ATL33-RELATEDChr01-View