Anchorpoints
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
| Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|---|
| Arabidopsis thaliana | AT3G10400 | RNA recognition motif and CCHC-type zinc finger domains containing protein Encodes a U12-type spliceosomal protein U11/U12-31K. Involved in U12 intron splicing via RNA chaperone activity and affects plant development. RNA recognition motif and CCHC-type zinc finger domains containing protein%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 16 plant structures%3B EXPRESSED DURING: 7 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Ribonucleoprotein%2C BRUNO-like (InterPro:IPR015903)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%2C Zinc finger%2C CCHC-type (InterPro:IPR001878)%3B BEST Arabidopsis thaliana protein match is: ortholog of human splicing factor SC35 (TAIR:AT5G64200.2)%3B Has 867 Blast hits to 867 proteins in 310 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 452%3B Fungi - 160%3B Plants - 158%3B Viruses - 0%3B Other Eukaryotes - 97 (source: NCBI BLink). | Chr3 | + | View |
| Populus trichocarpa | Potri.010G227500 | K13154 - U11/U12 small nuclear ribonucleoprotein 31 kDa protein (ZCRB1) | Chr10 | + | View |