Functional clusters
Information
- Type InterPro
- Description Trans-isoprenyl diphosphate synthases, bacterial-type
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amborella trichopoda | AmTr_v1.0_scaffold00133 | 5 | CH_atr_554 | 2 | 2 | 0.000476644 |
| Oryza alta | GWHAZTO00000024 | 5 | CH_oal_1788 | 2 | 2 | 0.00090681 |
| Oryza alta | GWHAZTO00000021 | 5 | CH_oal_1789 | 2 | 2 | 0.00090681 |
| Oryza alta | GWHAZTO00000009 | 5 | CH_oal_486 | 3 | 3 | 0.0000000730945 |
| Amborella trichopoda | AmTr_v1.0_scaffold00133 | 6 | CH_atr_554 | 2 | 2 | 0.000476644 |
| Oryza alta | GWHAZTO00000024 | 6 | CH_oal_1788 | 2 | 2 | 0.00090681 |
| Oryza alta | GWHAZTO00000021 | 6 | CH_oal_1789 | 2 | 2 | 0.00090681 |
| Oryza alta | GWHAZTO00000009 | 6 | CH_oal_486 | 3 | 3 | 0.0000000730945 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |