Functional clusters
Information
- Type InterPro
- Description Transcription facto Tfc3-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis thaliana | Chr1 | 5 | CH_ath_104 | 5 | 47 | 0.0000000000464797 |
| Eragrostis curvula | 1 | 5 | CH_ecu_533 | 4 | 18 | 0.0000000080209 |
| Magnolia biondii | Chr06 | 5 | CH_mbi_453 | 3 | 9 | 0.000000297156 |
| Miscanthus sinensis | Chr03 | 5 | CH_msi_968 | 2 | 2 | 0.000321989 |
| Oryza alta | GWHAZTO00000005 | 5 | CH_oal_405 | 3 | 3 | 0.0000000121824 |
| Oryza sativa Kitaake | Chr2 | 5 | CH_osak_169 | 4 | 4 | 0.0000000000374499 |
| Oryza sativa Kitaake | Chr5 | 5 | CH_osak_363 | 3 | 3 | 0.000000266126 |
| Sequoiadendron giganteum | chr10 | 5 | CH_sgi_249 | 6 | 9 | 3.63017e-18 |
| Triticum aestivum | Chr6A | 5 | CH_tae_2467 | 2 | 2 | 0.000523785 |
| Vanilla planifolia | CM028154.1 | 5 | CH_vpl_442 | 2 | 2 | 0.000073888 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00048.1 | 5 | CH_zjn_307 | 2 | 2 | 0.0000369952 |
| Zea mays B73 | 5 | 5 | CH_zma_5 | 13 | 22 | 1.87189e-35 |
| Zea mays B73 | 5 | 5 | CH_zma_59 | 5 | 6 | 0.00000000000476782 |
| Arabidopsis thaliana | Chr1 | 6 | CH_ath_104 | 5 | 47 | 0.0000000000464797 |
| Eragrostis curvula | 1 | 6 | CH_ecu_533 | 4 | 18 | 0.0000000080209 |
| Magnolia biondii | Chr06 | 6 | CH_mbi_453 | 3 | 9 | 0.000000297156 |
| Miscanthus sinensis | Chr03 | 6 | CH_msi_968 | 2 | 2 | 0.000321989 |
| Oryza alta | GWHAZTO00000005 | 6 | CH_oal_405 | 3 | 3 | 0.0000000121824 |
| Oryza sativa Kitaake | Chr2 | 6 | CH_osak_169 | 4 | 4 | 0.0000000000374499 |
| Oryza sativa Kitaake | Chr5 | 6 | CH_osak_363 | 3 | 3 | 0.000000266126 |
| Sequoiadendron giganteum | chr10 | 6 | CH_sgi_249 | 6 | 9 | 3.63017e-18 |
| Triticum aestivum | Chr6A | 6 | CH_tae_2467 | 2 | 2 | 0.000523785 |
| Vanilla planifolia | CM028154.1 | 6 | CH_vpl_442 | 2 | 2 | 0.000073888 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00048.1 | 6 | CH_zjn_307 | 2 | 2 | 0.0000369952 |
| Zea mays B73 | 5 | 6 | CH_zma_5 | 13 | 22 | 1.87189e-35 |
| Zea mays B73 | 5 | 6 | CH_zma_59 | 5 | 6 | 0.00000000000476782 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |