Functional clusters
Information
- Type InterPro
- Description Protein CHUP1-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Magnolia biondii | Chr16 | 5 | CH_mbi_328 | 4 | 6 | 0.0000000157655 |
| Magnolia biondii | Chr06 | 5 | CH_mbi_698 | 3 | 5 | 0.0000288536 |
| Sequoiadendron giganteum | chr1 | 5 | CH_sgi_2596 | 2 | 2 | 0.000730727 |
| Saccharum spontaneum | Chr6D | 5 | CH_ssp_1197 | 3 | 6 | 0.000055907 |
| Vanilla planifolia | CM028150.1 | 5 | CH_vpl_103 | 4 | 5 | 0.0000000110094 |
| Vanilla planifolia | CM028151.1 | 5 | CH_vpl_663 | 3 | 10 | 0.000548803 |
| Magnolia biondii | Chr16 | 6 | CH_mbi_328 | 4 | 6 | 0.0000000157655 |
| Magnolia biondii | Chr06 | 6 | CH_mbi_698 | 3 | 5 | 0.0000288536 |
| Sequoiadendron giganteum | chr1 | 6 | CH_sgi_2596 | 2 | 2 | 0.000730727 |
| Saccharum spontaneum | Chr6D | 6 | CH_ssp_1197 | 3 | 6 | 0.000055907 |
| Vanilla planifolia | CM028150.1 | 6 | CH_vpl_103 | 4 | 5 | 0.0000000110094 |
| Vanilla planifolia | CM028151.1 | 6 | CH_vpl_663 | 3 | 10 | 0.000548803 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |