Functional clusters
Information
- Type InterPro
- Description NEDD8 ultimate buster 1
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Ceratophyllum demersum | 3 | 5 | CH_cde_247 | 2 | 2 | 0.0000789796 |
| Chlamydomonas reinhardtii | chromosome_3 | 5 | CH_cre_29 | 3 | 3 | 0.000000019404 |
| Musa acuminata | chr06 | 5 | CH_mac_115 | 3 | 5 | 0.0000000484232 |
| Oryza alta | GWHAZTO00000004 | 5 | CH_oal_1356 | 2 | 2 | 0.000201513 |
| Oryza alta | GWHAZTO00000007 | 5 | CH_oal_575 | 3 | 8 | 0.000000341065 |
| Spirodela polyrhiza | pseudo31 | 5 | CH_spo_359 | 2 | 2 | 0.000305764 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00023.1 | 5 | CH_zjn_301 | 2 | 2 | 0.0000369952 |
| Ceratophyllum demersum | 3 | 6 | CH_cde_247 | 2 | 2 | 0.0000789796 |
| Chlamydomonas reinhardtii | chromosome_3 | 6 | CH_cre_29 | 3 | 3 | 0.000000019404 |
| Musa acuminata | chr06 | 6 | CH_mac_115 | 3 | 5 | 0.0000000484232 |
| Oryza alta | GWHAZTO00000004 | 6 | CH_oal_1356 | 2 | 2 | 0.000201513 |
| Oryza alta | GWHAZTO00000007 | 6 | CH_oal_575 | 3 | 8 | 0.000000341065 |
| Spirodela polyrhiza | pseudo31 | 6 | CH_spo_359 | 2 | 2 | 0.000305764 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00023.1 | 6 | CH_zjn_301 | 2 | 2 | 0.0000369952 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |