Functional clusters
Information
- Type InterPro
- Description UDP-sugar pyrophosphorylase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Allium sativum | chr3 | 5 | CH_asa_573 | 3 | 4 | 0.00000148666 |
| Lolium perenne | Lp_chr7_0.1 | 5 | CH_lpe_308 | 3 | 5 | 0.000000867717 |
| Secale cereale | GWHASIY00000007 | 5 | CH_sce_567 | 3 | 7 | 0.00000217594 |
| Sequoiadendron giganteum | chr1 | 5 | CH_sgi_1221 | 3 | 3 | 0.000000587373 |
| Sequoiadendron giganteum | chr6 | 5 | CH_sgi_655 | 4 | 4 | 0.000000000114461 |
| Vanilla planifolia | CM028151.1 | 5 | CH_vpl_472 | 3 | 8 | 0.000130956 |
| Vanilla planifolia | CM028152.1 | 5 | CH_vpl_678 | 3 | 13 | 0.000667764 |
| Allium sativum | chr3 | 6 | CH_asa_573 | 3 | 4 | 0.00000148666 |
| Lolium perenne | Lp_chr7_0.1 | 6 | CH_lpe_308 | 3 | 5 | 0.000000867717 |
| Secale cereale | GWHASIY00000007 | 6 | CH_sce_567 | 3 | 7 | 0.00000217594 |
| Sequoiadendron giganteum | chr1 | 6 | CH_sgi_1221 | 3 | 3 | 0.000000587373 |
| Sequoiadendron giganteum | chr6 | 6 | CH_sgi_655 | 4 | 4 | 0.000000000114461 |
| Vanilla planifolia | CM028151.1 | 6 | CH_vpl_472 | 3 | 8 | 0.000130956 |
| Vanilla planifolia | CM028152.1 | 6 | CH_vpl_678 | 3 | 13 | 0.000667764 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |