Functional clusters
Information
- Type InterPro
- Description Peptidase S8/S53 domain superfamily
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Allium sativum | chr7_1 | 5 | CH_asa_343 | 6 | 12 | 0.0000000128798 |
| Amborella trichopoda | AmTr_v1.0_scaffold00122 | 5 | CH_atr_331 | 4 | 5 | 0.0000228686 |
| Amborella trichopoda | AmTr_v1.0_scaffold00017 | 5 | CH_atr_4 | 21 | 29 | 9.82875e-42 |
| Cenchrus purpureus | GWHAORA00000007 | 5 | CH_cpu_56 | 15 | 28 | 2.67503e-25 |
| Eragrostis curvula | Contig785 | 5 | CH_ecu_1399 | 3 | 3 | 0.000473401 |
| Eragrostis curvula | 1 | 5 | CH_ecu_551 | 5 | 6 | 0.0000000118622 |
| Glycine max | Gm09 | 5 | CH_gma_851 | 3 | 3 | 0.00053356 |
| Musa acuminata | chr09 | 5 | CH_mac_369 | 3 | 3 | 0.000368405 |
| Magnolia biondii | Chr18 | 5 | CH_mbi_164 | 6 | 7 | 0.00000000000855833 |
| Oryza sativa ssp. indica | Chr4 | 5 | CH_osaindica_13 | 14 | 27 | 1.88048e-28 |
| Phyllostachys edulis | hic_scaffold_23 | 5 | CH_ped_1 | 25 | 38 | 7.72734e-51 |
| Sequoiadendron giganteum | chr1 | 5 | CH_sgi_181 | 11 | 13 | 2.30396e-21 |
| Sequoiadendron giganteum | chr8 | 5 | CH_sgi_957 | 5 | 5 | 0.0000000210462 |
| Selaginella moellendorffii | scaffold_52 | 5 | CH_smo_167 | 5 | 11 | 0.0000149413 |
| Selaginella moellendorffii | scaffold_77 | 5 | CH_smo_168 | 5 | 11 | 0.0000149413 |
| Spirodela polyrhiza | pseudo10 | 5 | CH_spo_5 | 18 | 29 | 4.24545e-35 |
| Vanilla planifolia | JADCNL010000219.1 | 5 | CH_vpl_226 | 4 | 4 | 0.00000191418 |
| Vanilla planifolia | CM028150.1 | 5 | CH_vpl_63 | 10 | 67 | 0.000000000165943 |
| Vanilla planifolia | CM028150.1 | 5 | CH_vpl_679 | 3 | 3 | 0.000672846 |
| Allium sativum | chr7_1 | 6 | CH_asa_343 | 6 | 12 | 0.0000000128798 |
| Amborella trichopoda | AmTr_v1.0_scaffold00122 | 6 | CH_atr_331 | 4 | 5 | 0.0000228686 |
| Amborella trichopoda | AmTr_v1.0_scaffold00017 | 6 | CH_atr_4 | 21 | 29 | 9.82875e-42 |
| Cenchrus purpureus | GWHAORA00000007 | 6 | CH_cpu_56 | 15 | 28 | 2.67503e-25 |
| Eragrostis curvula | Contig785 | 6 | CH_ecu_1399 | 3 | 3 | 0.000473401 |
| Eragrostis curvula | 1 | 6 | CH_ecu_551 | 5 | 6 | 0.0000000118622 |
| Glycine max | Gm09 | 6 | CH_gma_851 | 3 | 3 | 0.00053356 |
| Musa acuminata | chr09 | 6 | CH_mac_369 | 3 | 3 | 0.000368405 |
| Magnolia biondii | Chr18 | 6 | CH_mbi_164 | 6 | 7 | 0.00000000000855833 |
| Oryza sativa ssp. indica | Chr4 | 6 | CH_osaindica_13 | 14 | 27 | 1.88048e-28 |
| Phyllostachys edulis | hic_scaffold_23 | 6 | CH_ped_1 | 25 | 38 | 7.72734e-51 |
| Sequoiadendron giganteum | chr1 | 6 | CH_sgi_181 | 11 | 13 | 2.30396e-21 |
| Sequoiadendron giganteum | chr8 | 6 | CH_sgi_957 | 5 | 5 | 0.0000000210462 |
| Selaginella moellendorffii | scaffold_52 | 6 | CH_smo_167 | 5 | 11 | 0.0000149413 |
| Selaginella moellendorffii | scaffold_77 | 6 | CH_smo_168 | 5 | 11 | 0.0000149413 |
| Spirodela polyrhiza | pseudo10 | 6 | CH_spo_5 | 18 | 29 | 4.24545e-35 |
| Vanilla planifolia | JADCNL010000219.1 | 6 | CH_vpl_226 | 4 | 4 | 0.00000191418 |
| Vanilla planifolia | CM028150.1 | 6 | CH_vpl_63 | 10 | 67 | 0.000000000165943 |
| Vanilla planifolia | CM028150.1 | 6 | CH_vpl_679 | 3 | 3 | 0.000672846 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |