Functional clusters
Information
- Type InterPro
- Description NADP-dependent oxidoreductase domain superfamily
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Digitaria exilis | Dexi_CM05836_chr05A | 5 | CH_dex_392 | 5 | 6 | 0.00000000444098 |
| Eragrostis curvula | Contig30 | 5 | CH_ecu_24 | 17 | 26 | 7.76346e-39 |
| Eragrostis curvula | Contig8 | 5 | CH_ecu_268 | 8 | 19 | 0.0000000000000416476 |
| Elaeis guineensis | p5_sc00010 | 5 | CH_egu_132 | 4 | 5 | 0.000000223631 |
| Musa acuminata | chr08 | 5 | CH_mac_149 | 4 | 6 | 0.00000048552 |
| Magnolia biondii | Chr11 | 5 | CH_mbi_130 | 6 | 8 | 0.000000000000117427 |
| Magnolia biondii | Chr04 | 5 | CH_mbi_340 | 4 | 4 | 0.0000000253686 |
| Oryza alta | GWHAZTO00000016 | 5 | CH_oal_337 | 6 | 28 | 0.00000000304651 |
| Oryza alta | GWHAZTO00000004 | 5 | CH_oal_498 | 4 | 5 | 0.0000000999119 |
| Oryza alta | GWHAZTO00000004 | 5 | CH_oal_635 | 4 | 7 | 0.000000698648 |
| Oryza brachyantha | 10 | 5 | CH_obr_86 | 5 | 5 | 0.0000000000162269 |
| Oryza sativa ssp. indica | Chr10 | 5 | CH_osaindica_86 | 6 | 8 | 0.00000000000011003 |
| Oryza sativa ssp. japonica | chr04 | 5 | CH_osa_118 | 6 | 12 | 0.00000000000942651 |
| Panicum hallii | Chr03 | 5 | CH_pha_283 | 4 | 5 | 0.000000268796 |
| Sequoiadendron giganteum | chr3 | 5 | CH_sgi_125 | 13 | 23 | 1.91597e-25 |
| Saccharum spontaneum | Chr7B | 5 | CH_ssp_651 | 4 | 4 | 0.0000006615 |
| Triticum dicoccoides | 1A | 5 | CH_tdi_300 | 5 | 7 | 0.00000000312785 |
| Digitaria exilis | Dexi_CM05836_chr05A | 6 | CH_dex_392 | 5 | 6 | 0.00000000444098 |
| Eragrostis curvula | Contig30 | 6 | CH_ecu_24 | 17 | 26 | 7.76346e-39 |
| Eragrostis curvula | Contig8 | 6 | CH_ecu_268 | 8 | 19 | 0.0000000000000416476 |
| Elaeis guineensis | p5_sc00010 | 6 | CH_egu_132 | 4 | 5 | 0.000000223631 |
| Musa acuminata | chr08 | 6 | CH_mac_149 | 4 | 6 | 0.00000048552 |
| Magnolia biondii | Chr11 | 6 | CH_mbi_130 | 6 | 8 | 0.000000000000117427 |
| Magnolia biondii | Chr04 | 6 | CH_mbi_340 | 4 | 4 | 0.0000000253686 |
| Oryza alta | GWHAZTO00000016 | 6 | CH_oal_337 | 6 | 28 | 0.00000000304651 |
| Oryza alta | GWHAZTO00000004 | 6 | CH_oal_498 | 4 | 5 | 0.0000000999119 |
| Oryza alta | GWHAZTO00000004 | 6 | CH_oal_635 | 4 | 7 | 0.000000698648 |
| Oryza brachyantha | 10 | 6 | CH_obr_86 | 5 | 5 | 0.0000000000162269 |
| Oryza sativa ssp. indica | Chr10 | 6 | CH_osaindica_86 | 6 | 8 | 0.00000000000011003 |
| Oryza sativa ssp. japonica | chr04 | 6 | CH_osa_118 | 6 | 12 | 0.00000000000942651 |
| Panicum hallii | Chr03 | 6 | CH_pha_283 | 4 | 5 | 0.000000268796 |
| Sequoiadendron giganteum | chr3 | 6 | CH_sgi_125 | 13 | 23 | 1.91597e-25 |
| Saccharum spontaneum | Chr7B | 6 | CH_ssp_651 | 4 | 4 | 0.0000006615 |
| Triticum dicoccoides | 1A | 6 | CH_tdi_300 | 5 | 7 | 0.00000000312785 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |