Functional clusters
Information
- Type InterPro
- Description ClpP/crotonase-like domain superfamily
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Lolium perenne | Lp_chr4_0 | 5 | CH_lpe_728 | 3 | 8 | 0.000672884 |
| Oryza alta | GWHAZTO00000011 | 5 | CH_oal_964 | 3 | 3 | 0.0000445572 |
| Oryza brachyantha | 11 | 5 | CH_obr_337 | 3 | 3 | 0.0000350309 |
| Oryza sativa Kitaake | Chr11 | 5 | CH_osak_473 | 5 | 28 | 0.00000543482 |
| Oryza sativa ssp. japonica | chr11 | 5 | CH_osa_603 | 4 | 22 | 0.000167204 |
| Phyllostachys edulis | hic_scaffold_2 | 5 | CH_ped_389 | 4 | 5 | 0.00000104279 |
| Saccharum spontaneum | Chr3C | 5 | CH_ssp_411 | 5 | 9 | 0.0000000207195 |
| Triticum dicoccoides | 1A | 5 | CH_tdi_1156 | 3 | 4 | 0.000521741 |
| Lolium perenne | Lp_chr4_0 | 6 | CH_lpe_728 | 3 | 8 | 0.000672884 |
| Oryza alta | GWHAZTO00000011 | 6 | CH_oal_964 | 3 | 3 | 0.0000445572 |
| Oryza brachyantha | 11 | 6 | CH_obr_337 | 3 | 3 | 0.0000350309 |
| Oryza sativa Kitaake | Chr11 | 6 | CH_osak_473 | 5 | 28 | 0.00000543482 |
| Oryza sativa ssp. japonica | chr11 | 6 | CH_osa_603 | 4 | 22 | 0.000167204 |
| Phyllostachys edulis | hic_scaffold_2 | 6 | CH_ped_389 | 4 | 5 | 0.00000104279 |
| Saccharum spontaneum | Chr3C | 6 | CH_ssp_411 | 5 | 9 | 0.0000000207195 |
| Triticum dicoccoides | 1A | 6 | CH_tdi_1156 | 3 | 4 | 0.000521741 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |