Functional clusters

Information

  • Type InterPro
  • Description Cysteinyl-tRNA synthetase/mycothiol ligase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00033 5 CH_atr_506 2 2 0.000238322
Brachypodium distachyon Bd3 5 CH_bdi_536 2 2 0.000370005
Digitaria exilis Dexi_CM05836_chr02B 5 CH_dex_1323 2 2 0.000334202
Magnolia biondii Chr07 5 CH_mbi_524 3 7 0.00000123803
Miscanthus sinensis Chr01 5 CH_msi_1158 2 2 0.000901568
Sorghum bicolor Chr01 5 CH_sbi_673 2 2 0.000352009
Sequoiadendron giganteum chr8 5 CH_sgi_2288 2 2 0.000292291
Sequoiadendron giganteum chr3 5 CH_sgi_2289 2 2 0.000292291
Saccharum spontaneum Chr2A 5 CH_ssp_602 3 4 0.000000409834
Triticum dicoccoides 1B 5 CH_tdi_1247 2 2 0.000831181
Vanilla planifolia CM028159.1 5 CH_vpl_272 3 12 0.00000720253
Zoysia japonica ssp. nagirizaki Zjn_sc00135.1 5 CH_zjn_518 2 2 0.000369952
Zostera marina Chr03 5 CH_zosmarina_297 2 2 0.000579346
Amborella trichopoda AmTr_v1.0_scaffold00033 6 CH_atr_506 2 2 0.000238322
Brachypodium distachyon Bd3 6 CH_bdi_536 2 2 0.000370005
Digitaria exilis Dexi_CM05836_chr02B 6 CH_dex_1323 2 2 0.000334202
Magnolia biondii Chr07 6 CH_mbi_524 3 7 0.00000123803
Miscanthus sinensis Chr01 6 CH_msi_1158 2 2 0.000901568
Sorghum bicolor Chr01 6 CH_sbi_673 2 2 0.000352009
Sequoiadendron giganteum chr8 6 CH_sgi_2288 2 2 0.000292291
Sequoiadendron giganteum chr3 6 CH_sgi_2289 2 2 0.000292291
Saccharum spontaneum Chr2A 6 CH_ssp_602 3 4 0.000000409834
Triticum dicoccoides 1B 6 CH_tdi_1247 2 2 0.000831181
Vanilla planifolia CM028159.1 6 CH_vpl_272 3 12 0.00000720253
Zoysia japonica ssp. nagirizaki Zjn_sc00135.1 6 CH_zjn_518 2 2 0.000369952
Zostera marina Chr03 6 CH_zosmarina_297 2 2 0.000579346

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001