Functional clusters
Information
- Type InterPro
- Description Mechanosensitive ion channel MscS-like, plants/fungi
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Ananas comosus | LG20 | 5 | CH_aco_27 | 4 | 4 | 0.0000000000599285 |
| Asparagus officinalis | AsparagusV1_06 | 5 | CH_aof_16 | 5 | 9 | 0.00000000000777112 |
| Arabidopsis thaliana | Chr2 | 5 | CH_ath_627 | 2 | 2 | 0.000802177 |
| Amborella trichopoda | AmTr_v1.0_scaffold00048 | 5 | CH_atr_557 | 2 | 2 | 0.000476644 |
| Ceratophyllum demersum | 3 | 5 | CH_cde_383 | 2 | 2 | 0.000473878 |
| Eragrostis curvula | 3 | 5 | CH_ecu_880 | 3 | 6 | 0.00000378719 |
| Lolium perenne | Lp_chr7_0.1 | 5 | CH_lpe_255 | 3 | 3 | 0.000000130177 |
| Lolium perenne | Lp_chr6_0 | 5 | CH_lpe_256 | 3 | 3 | 0.000000130177 |
| Musa acuminata | chr07 | 5 | CH_mac_394 | 2 | 2 | 0.000568182 |
| Magnolia biondii | Chr04 | 5 | CH_mbi_136 | 5 | 6 | 0.000000000000322185 |
| Magnolia biondii | Chr05 | 5 | CH_mbi_215 | 5 | 15 | 0.000000000160984 |
| Oryza alta | GWHAZTO00000004 | 5 | CH_oal_1688 | 2 | 2 | 0.000725448 |
| Oryza alta | GWHAZTO00000002 | 5 | CH_oal_1689 | 2 | 2 | 0.000725448 |
| Oryza alta | GWHAZTO00000016 | 5 | CH_oal_1690 | 2 | 2 | 0.000725448 |
| Sequoiadendron giganteum | chr11 | 5 | CH_sgi_2005 | 2 | 2 | 0.000146145 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00004.1 | 5 | CH_zjn_431 | 2 | 2 | 0.000221971 |
| Ananas comosus | LG20 | 6 | CH_aco_27 | 4 | 4 | 0.0000000000599285 |
| Asparagus officinalis | AsparagusV1_06 | 6 | CH_aof_16 | 5 | 9 | 0.00000000000777112 |
| Arabidopsis thaliana | Chr2 | 6 | CH_ath_627 | 2 | 2 | 0.000802177 |
| Amborella trichopoda | AmTr_v1.0_scaffold00048 | 6 | CH_atr_557 | 2 | 2 | 0.000476644 |
| Ceratophyllum demersum | 3 | 6 | CH_cde_383 | 2 | 2 | 0.000473878 |
| Eragrostis curvula | 3 | 6 | CH_ecu_880 | 3 | 6 | 0.00000378719 |
| Lolium perenne | Lp_chr7_0.1 | 6 | CH_lpe_255 | 3 | 3 | 0.000000130177 |
| Lolium perenne | Lp_chr6_0 | 6 | CH_lpe_256 | 3 | 3 | 0.000000130177 |
| Musa acuminata | chr07 | 6 | CH_mac_394 | 2 | 2 | 0.000568182 |
| Magnolia biondii | Chr04 | 6 | CH_mbi_136 | 5 | 6 | 0.000000000000322185 |
| Magnolia biondii | Chr05 | 6 | CH_mbi_215 | 5 | 15 | 0.000000000160984 |
| Oryza alta | GWHAZTO00000004 | 6 | CH_oal_1688 | 2 | 2 | 0.000725448 |
| Oryza alta | GWHAZTO00000002 | 6 | CH_oal_1689 | 2 | 2 | 0.000725448 |
| Oryza alta | GWHAZTO00000016 | 6 | CH_oal_1690 | 2 | 2 | 0.000725448 |
| Sequoiadendron giganteum | chr11 | 6 | CH_sgi_2005 | 2 | 2 | 0.000146145 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00004.1 | 6 | CH_zjn_431 | 2 | 2 | 0.000221971 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |