Functional clusters

Information

  • Type InterPro
  • Description Coatomer, alpha subunit, C-terminal

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Asparagus officinalis AsparagusV1_03 5 CH_aof_67 3 3 0.0000003
Allium sativum chr7_1 5 CH_asa_1160 2 2 0.000232522
Oryza alta GWHAZTO00000015 5 CH_oal_1448 2 2 0.00030227
Oryza brachyantha 3 5 CH_obr_152 3 3 0.0000000214092
Oryza sativa ssp. indica Chr3 5 CH_osaindica_563 2 2 0.000154983
Oryza sativa Kitaake Chr3 5 CH_osak_692 2 2 0.000168857
Oryza sativa ssp. japonica chr03 5 CH_osa_782 2 4 0.000950562
Phyllostachys edulis hic_scaffold_15 5 CH_ped_815 2 2 0.000407456
Asparagus officinalis AsparagusV1_03 6 CH_aof_67 3 3 0.0000003
Allium sativum chr7_1 6 CH_asa_1160 2 2 0.000232522
Oryza alta GWHAZTO00000015 6 CH_oal_1448 2 2 0.00030227
Oryza brachyantha 3 6 CH_obr_152 3 3 0.0000000214092
Oryza sativa ssp. indica Chr3 6 CH_osaindica_563 2 2 0.000154983
Oryza sativa Kitaake Chr3 6 CH_osak_692 2 2 0.000168857
Oryza sativa ssp. japonica chr03 6 CH_osa_782 2 4 0.000950562
Phyllostachys edulis hic_scaffold_15 6 CH_ped_815 2 2 0.000407456

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001