Functional clusters
Information
- Type InterPro
- Description Protein of unknown function PDDEXK-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Asparagus officinalis | AsparagusV1_05 | 5 | CH_aof_98 | 3 | 3 | 0.00000245143 |
| Allium sativum | chr1 | 5 | CH_asa_644 | 3 | 3 | 0.00000585732 |
| Allium sativum | chr6 | 5 | CH_asa_68 | 8 | 18 | 2.81878e-18 |
| Allium sativum | chr6 | 5 | CH_asa_742 | 3 | 4 | 0.000023421 |
| Calamus simplicifolius | scaffold135 | 5 | CH_calsi_218 | 3 | 3 | 0.00000148727 |
| Chlamydomonas reinhardtii | chromosome_16 | 5 | CH_cre_32 | 7 | 49 | 0.0000000466952 |
| Sequoiadendron giganteum | chr3 | 5 | CH_sgi_146 | 8 | 8 | 1.55095e-23 |
| Spirodela polyrhiza | pseudo13 | 5 | CH_spo_66 | 4 | 4 | 0.000000000400269 |
| Vanilla planifolia | CM028159.1 | 5 | CH_vpl_617 | 2 | 2 | 0.000443328 |
| Asparagus officinalis | AsparagusV1_05 | 6 | CH_aof_98 | 3 | 3 | 0.00000245143 |
| Allium sativum | chr1 | 6 | CH_asa_644 | 3 | 3 | 0.00000585732 |
| Allium sativum | chr6 | 6 | CH_asa_68 | 8 | 18 | 2.81878e-18 |
| Allium sativum | chr6 | 6 | CH_asa_742 | 3 | 4 | 0.000023421 |
| Calamus simplicifolius | scaffold135 | 6 | CH_calsi_218 | 3 | 3 | 0.00000148727 |
| Chlamydomonas reinhardtii | chromosome_16 | 6 | CH_cre_32 | 7 | 49 | 0.0000000466952 |
| Sequoiadendron giganteum | chr3 | 6 | CH_sgi_146 | 8 | 8 | 1.55095e-23 |
| Spirodela polyrhiza | pseudo13 | 6 | CH_spo_66 | 4 | 4 | 0.000000000400269 |
| Vanilla planifolia | CM028159.1 | 6 | CH_vpl_617 | 2 | 2 | 0.000443328 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |