Functional clusters
Information
- Type Gene Ontology
- Description regulation of defense response to bacterium
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Chara braunii | BFEA01000267 | 3 | CH_cbr_133 | 2 | 3 | 0.000215773 |
| Triticum turgidum | chr2A | 3 | CH_ttu_259 | 4 | 7 | 0.000000236305 |
| Triticum turgidum | chr2B | 3 | CH_ttu_466 | 3 | 4 | 0.0000494202 |
| Chara braunii | BFEA01000267 | 4 | CH_cbr_133 | 2 | 3 | 0.000215773 |
| Triticum turgidum | chr2A | 4 | CH_ttu_259 | 4 | 7 | 0.000000236305 |
| Triticum turgidum | chr2B | 4 | CH_ttu_466 | 3 | 4 | 0.0000494202 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:1900425 | negative regulation of defense response to bacterium | 8 |
| GO:1900426 | positive regulation of defense response to bacterium | 4 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |