Functional clusters
Information
- Type Gene Ontology
- Description carbohydrate derivative binding
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Allium sativum | chr6 | 3 | CH_asa_851 | 15 | 41 | 0.00091709 |
Brachypodium distachyon | Bd4 | 3 | CH_bdi_100 | 27 | 76 | 0.000000380517 |
Solanum lycopersicum | SL4.0ch07 | 3 | CH_sly_487 | 9 | 11 | 0.000463963 |
Allium sativum | chr6 | 4 | CH_asa_851 | 15 | 41 | 0.00091709 |
Brachypodium distachyon | Bd4 | 4 | CH_bdi_100 | 27 | 76 | 0.000000380517 |
Solanum lycopersicum | SL4.0ch07 | 4 | CH_sly_487 | 9 | 11 | 0.000463963 |
Available child term results
Ontology identifier | Description | Number of clusters |
---|---|---|
GO:0000062 | fatty-acyl-CoA binding | 4 |
GO:0001530 | lipopolysaccharide binding | 2 |
GO:0005524 | ATP binding | 32 |
GO:0005525 | GTP binding | 8 |
GO:0008061 | chitin binding | 64 |
GO:0010181 | FMN binding | 122 |
GO:0030552 | cAMP binding | 2 |
GO:0032549 | ribonucleoside binding | 30 |
GO:0032553 | ribonucleotide binding | 76 |
GO:0032555 | purine ribonucleotide binding | 8 |
GO:0042834 | peptidoglycan binding | 8 |
GO:0043394 | proteoglycan binding | 20 |
GO:0043531 | ADP binding | 774 |
GO:2001227 | quercitrin binding | 8 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |