Functional clusters

Information

  • Type Gene Ontology
  • Description carbohydrate derivative binding

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Allium sativum chr6 3 CH_asa_851 15 41 0.00091709
Brachypodium distachyon Bd4 3 CH_bdi_100 27 76 0.000000380517
Solanum lycopersicum SL4.0ch07 3 CH_sly_487 9 11 0.000463963
Allium sativum chr6 4 CH_asa_851 15 41 0.00091709
Brachypodium distachyon Bd4 4 CH_bdi_100 27 76 0.000000380517
Solanum lycopersicum SL4.0ch07 4 CH_sly_487 9 11 0.000463963

Available child term results

Ontology identifier Description Number of clusters
GO:0000062 fatty-acyl-CoA binding 4
GO:0001530 lipopolysaccharide binding 2
GO:0005524 ATP binding 32
GO:0005525 GTP binding 8
GO:0008061 chitin binding 64
GO:0010181 FMN binding 122
GO:0030552 cAMP binding 2
GO:0032549 ribonucleoside binding 30
GO:0032553 ribonucleotide binding 76
GO:0032555 purine ribonucleotide binding 8
GO:0042834 peptidoglycan binding 8
GO:0043394 proteoglycan binding 20
GO:0043531 ADP binding 774
GO:2001227 quercitrin binding 8

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001