Functional clusters

Information

  • Type Gene Ontology
  • Description low-affinity nitrate transmembrane transporter activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Allium sativum chr2 3 CH_asa_274 3 5 0.000000788363
Allium sativum chr7_1 3 CH_asa_357 3 9 0.0000066202
Arabidopsis thaliana Chr1 3 CH_ath_103 4 6 0.00000000034914
Arabidopsis thaliana Chr1 3 CH_ath_334 3 8 0.0000113704
Magnolia biondii Chr17 3 CH_mbi_176 3 3 0.0000000353808
Populus trichocarpa Chr19 3 CH_ptr_230 3 3 0.00000042096
Sequoiadendron giganteum chr9 3 CH_sgi_177 6 8 2.96575e-16
Sequoiadendron giganteum chr1 3 CH_sgi_313 5 9 0.0000000000068455
Triticum aestivum Chr1B 3 CH_tae_1303 2 4 0.000523785
Triticum dicoccoides 1B 3 CH_tdi_523 2 2 0.00029685
Triticum turgidum chr1B 3 CH_ttu_592 2 4 0.000312534
Allium sativum chr2 4 CH_asa_274 3 5 0.000000788363
Allium sativum chr7_1 4 CH_asa_357 3 9 0.0000066202
Arabidopsis thaliana Chr1 4 CH_ath_103 4 6 0.00000000034914
Arabidopsis thaliana Chr1 4 CH_ath_334 3 8 0.0000113704
Magnolia biondii Chr17 4 CH_mbi_176 3 3 0.0000000353808
Populus trichocarpa Chr19 4 CH_ptr_230 3 3 0.00000042096
Sequoiadendron giganteum chr9 4 CH_sgi_177 6 8 2.96575e-16
Sequoiadendron giganteum chr1 4 CH_sgi_313 5 9 0.0000000000068455
Triticum aestivum Chr1B 4 CH_tae_1303 2 4 0.000523785
Triticum dicoccoides 1B 4 CH_tdi_523 2 2 0.00029685
Triticum turgidum chr1B 4 CH_ttu_592 2 4 0.000312534

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001