Functional clusters
Information
- Type Gene Ontology
- Description linoleic acid epoxygenase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Asparagus officinalis | AsparagusV1_04 | 3 | CH_aof_111 | 2 | 2 | 0.000226775 |
| Brachypodium distachyon | Bd5 | 3 | CH_bdi_65 | 3 | 3 | 0.00000000570449 |
| Hordeum vulgare | chr2H | 3 | CH_hvu_80 | 4 | 16 | 0.000000000364892 |
| Lolium perenne | Lp_chr4_0 | 3 | CH_lpe_8 | 7 | 15 | 4.47057e-21 |
| Oryza alta | GWHAZTO00000004 | 3 | CH_oal_544 | 2 | 2 | 0.000120908 |
| Oryza alta | GWHAZTO00000016 | 3 | CH_oal_663 | 2 | 3 | 0.000362716 |
| Oryza brachyantha | 4 | 3 | CH_obr_207 | 2 | 2 | 0.0000597336 |
| Oryza sativa ssp. indica | Chr4 | 3 | CH_osaindica_306 | 2 | 3 | 0.000154979 |
| Oryza sativa Kitaake | Chr4 | 3 | CH_osak_301 | 2 | 2 | 0.0000562857 |
| Oryza sativa ssp. japonica | chr04 | 3 | CH_osa_289 | 2 | 2 | 0.0000528123 |
| Secale cereale | GWHASIY00000002 | 3 | CH_sce_179 | 4 | 15 | 0.0000000270265 |
| Sequoiadendron giganteum | chr1 | 3 | CH_sgi_72 | 8 | 13 | 2.64062e-25 |
| Triticum aestivum | Chr2D | 3 | CH_tae_355 | 4 | 8 | 0.00000000137564 |
| Triticum aestivum | Chr2A | 3 | CH_tae_899 | 3 | 9 | 0.0000160414 |
| Triticum dicoccoides | 2A | 3 | CH_tdi_257 | 3 | 6 | 0.00000148013 |
| Triticum turgidum | chr2B | 3 | CH_ttu_335 | 3 | 7 | 0.00000179441 |
| Zea mays B73 | 5 | 3 | CH_zma_348 | 2 | 2 | 0.000766969 |
| Asparagus officinalis | AsparagusV1_04 | 4 | CH_aof_111 | 2 | 2 | 0.000226775 |
| Brachypodium distachyon | Bd5 | 4 | CH_bdi_65 | 3 | 3 | 0.00000000570449 |
| Hordeum vulgare | chr2H | 4 | CH_hvu_80 | 4 | 16 | 0.000000000364892 |
| Lolium perenne | Lp_chr4_0 | 4 | CH_lpe_8 | 7 | 15 | 4.47057e-21 |
| Oryza alta | GWHAZTO00000004 | 4 | CH_oal_544 | 2 | 2 | 0.000120908 |
| Oryza alta | GWHAZTO00000016 | 4 | CH_oal_663 | 2 | 3 | 0.000362716 |
| Oryza brachyantha | 4 | 4 | CH_obr_207 | 2 | 2 | 0.0000597336 |
| Oryza sativa ssp. indica | Chr4 | 4 | CH_osaindica_306 | 2 | 3 | 0.000154979 |
| Oryza sativa Kitaake | Chr4 | 4 | CH_osak_301 | 2 | 2 | 0.0000562857 |
| Oryza sativa ssp. japonica | chr04 | 4 | CH_osa_289 | 2 | 2 | 0.0000528123 |
| Secale cereale | GWHASIY00000002 | 4 | CH_sce_179 | 4 | 15 | 0.0000000270265 |
| Sequoiadendron giganteum | chr1 | 4 | CH_sgi_72 | 8 | 13 | 2.64062e-25 |
| Triticum aestivum | Chr2D | 4 | CH_tae_355 | 4 | 8 | 0.00000000137564 |
| Triticum aestivum | Chr2A | 4 | CH_tae_899 | 3 | 9 | 0.0000160414 |
| Triticum dicoccoides | 2A | 4 | CH_tdi_257 | 3 | 6 | 0.00000148013 |
| Triticum turgidum | chr2B | 4 | CH_ttu_335 | 3 | 7 | 0.00000179441 |
| Zea mays B73 | 5 | 4 | CH_zma_348 | 2 | 2 | 0.000766969 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |