Functional clusters
Information
- Type Gene Ontology
- Description cellular response to hypoxia
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Asparagus officinalis | AsparagusV1_01 | 3 | CH_aof_149 | 6 | 19 | 0.000523217 |
| Allium sativum | chr1 | 3 | CH_asa_199 | 10 | 31 | 0.0000000560239 |
| Allium sativum | chr2 | 3 | CH_asa_406 | 8 | 26 | 0.0000165835 |
| Allium sativum | chr8 | 3 | CH_asa_844 | 4 | 4 | 0.000820512 |
| Aegilops tauschii | 5D | 3 | CH_ata_315 | 4 | 4 | 0.000189104 |
| Chlamydomonas reinhardtii | chromosome_11 | 3 | CH_cre_35 | 5 | 8 | 0.00000577393 |
| Eragrostis curvula | Contig8 | 3 | CH_ecu_613 | 7 | 26 | 0.0000438058 |
| Eragrostis curvula | 4 | 3 | CH_ecu_860 | 4 | 5 | 0.000868155 |
| Lolium perenne | Lp_chr3_0 | 3 | CH_lpe_134 | 7 | 16 | 0.0000000823171 |
| Lolium perenne | Lp_chr5_0 | 3 | CH_lpe_431 | 4 | 6 | 0.000754587 |
| Magnolia biondii | Chr02 | 3 | CH_mbi_23 | 11 | 11 | 7.10706e-19 |
| Populus trichocarpa | Chr19 | 3 | CH_ptr_52 | 13 | 15 | 6.22582e-18 |
| Sorghum bicolor | Chr09 | 3 | CH_sbi_465 | 5 | 11 | 0.00098179 |
| Secale cereale | GWHASIY00000005 | 3 | CH_sce_263 | 6 | 7 | 0.000000590406 |
| Secale cereale | GWHASIY00000005 | 3 | CH_sce_764 | 4 | 4 | 0.000688486 |
| Secale cereale | GWHASIY00000002 | 3 | CH_sce_765 | 4 | 4 | 0.000688486 |
| Sequoiadendron giganteum | chr3 | 3 | CH_sgi_1234 | 6 | 12 | 0.000358397 |
| Sequoiadendron giganteum | chr3 | 3 | CH_sgi_573 | 7 | 8 | 0.0000000483831 |
| Sequoiadendron giganteum | chr10 | 3 | CH_sgi_659 | 7 | 9 | 0.000000214934 |
| Sequoiadendron giganteum | chr6 | 3 | CH_sgi_857 | 7 | 13 | 0.00000973041 |
| Spirodela polyrhiza | pseudo13 | 3 | CH_spo_217 | 4 | 4 | 0.000657677 |
| Triticum aestivum | Chr5D | 3 | CH_tae_1353 | 4 | 4 | 0.000637521 |
| Triticum aestivum | Chr7B | 3 | CH_tae_329 | 7 | 7 | 0.000000000427825 |
| Triticum aestivum | Chr7A | 3 | CH_tae_706 | 6 | 8 | 0.00000134922 |
| Triticum aestivum | Chr7D | 3 | CH_tae_801 | 5 | 5 | 0.00000558742 |
| Triticum dicoccoides | 7A | 3 | CH_tdi_516 | 4 | 4 | 0.000257041 |
| Triticum turgidum | chr5B | 3 | CH_ttu_626 | 4 | 4 | 0.000398604 |
| Asparagus officinalis | AsparagusV1_01 | 4 | CH_aof_149 | 6 | 19 | 0.000523217 |
| Allium sativum | chr1 | 4 | CH_asa_199 | 10 | 31 | 0.0000000560239 |
| Allium sativum | chr2 | 4 | CH_asa_406 | 8 | 26 | 0.0000165835 |
| Allium sativum | chr8 | 4 | CH_asa_844 | 4 | 4 | 0.000820512 |
| Aegilops tauschii | 5D | 4 | CH_ata_315 | 4 | 4 | 0.000189104 |
| Chlamydomonas reinhardtii | chromosome_11 | 4 | CH_cre_35 | 5 | 8 | 0.00000577393 |
| Eragrostis curvula | Contig8 | 4 | CH_ecu_613 | 7 | 26 | 0.0000438058 |
| Eragrostis curvula | 4 | 4 | CH_ecu_860 | 4 | 5 | 0.000868155 |
| Lolium perenne | Lp_chr3_0 | 4 | CH_lpe_134 | 7 | 16 | 0.0000000823171 |
| Lolium perenne | Lp_chr5_0 | 4 | CH_lpe_431 | 4 | 6 | 0.000754587 |
| Magnolia biondii | Chr02 | 4 | CH_mbi_23 | 11 | 11 | 7.10706e-19 |
| Populus trichocarpa | Chr19 | 4 | CH_ptr_52 | 13 | 15 | 6.22582e-18 |
| Sorghum bicolor | Chr09 | 4 | CH_sbi_465 | 5 | 11 | 0.00098179 |
| Secale cereale | GWHASIY00000005 | 4 | CH_sce_263 | 6 | 7 | 0.000000590406 |
| Secale cereale | GWHASIY00000005 | 4 | CH_sce_764 | 4 | 4 | 0.000688486 |
| Secale cereale | GWHASIY00000002 | 4 | CH_sce_765 | 4 | 4 | 0.000688486 |
| Sequoiadendron giganteum | chr3 | 4 | CH_sgi_1234 | 6 | 12 | 0.000358397 |
| Sequoiadendron giganteum | chr3 | 4 | CH_sgi_573 | 7 | 8 | 0.0000000483831 |
| Sequoiadendron giganteum | chr10 | 4 | CH_sgi_659 | 7 | 9 | 0.000000214934 |
| Sequoiadendron giganteum | chr6 | 4 | CH_sgi_857 | 7 | 13 | 0.00000973041 |
| Spirodela polyrhiza | pseudo13 | 4 | CH_spo_217 | 4 | 4 | 0.000657677 |
| Triticum aestivum | Chr5D | 4 | CH_tae_1353 | 4 | 4 | 0.000637521 |
| Triticum aestivum | Chr7B | 4 | CH_tae_329 | 7 | 7 | 0.000000000427825 |
| Triticum aestivum | Chr7A | 4 | CH_tae_706 | 6 | 8 | 0.00000134922 |
| Triticum aestivum | Chr7D | 4 | CH_tae_801 | 5 | 5 | 0.00000558742 |
| Triticum dicoccoides | 7A | 4 | CH_tdi_516 | 4 | 4 | 0.000257041 |
| Triticum turgidum | chr5B | 4 | CH_ttu_626 | 4 | 4 | 0.000398604 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:1900037 | regulation of cellular response to hypoxia | 6 |
| GO:1900039 | positive regulation of cellular response to hypoxia | 6 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |