Functional clusters
Information
- Type Gene Ontology
- Description defense response to Gram-negative bacterium
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis thaliana | Chr3 | 3 | CH_ath_56 | 6 | 8 | 0.000000000000130443 |
| Glycine max | Gm01 | 3 | CH_gma_515 | 4 | 17 | 0.000520682 |
| Glycine max | Gm01 | 3 | CH_gma_550 | 3 | 4 | 0.000631629 |
| Populus trichocarpa | Chr12 | 3 | CH_ptr_155 | 5 | 6 | 0.00000000158675 |
| Sequoiadendron giganteum | chr10 | 3 | CH_sgi_315 | 6 | 6 | 0.0000000000078253 |
| Sequoiadendron giganteum | chr7 | 3 | CH_sgi_586 | 5 | 7 | 0.0000000699934 |
| Arabidopsis thaliana | Chr3 | 4 | CH_ath_56 | 6 | 8 | 0.000000000000130443 |
| Glycine max | Gm01 | 4 | CH_gma_515 | 4 | 17 | 0.000520682 |
| Glycine max | Gm01 | 4 | CH_gma_550 | 3 | 4 | 0.000631629 |
| Populus trichocarpa | Chr12 | 4 | CH_ptr_155 | 5 | 6 | 0.00000000158675 |
| Sequoiadendron giganteum | chr10 | 4 | CH_sgi_315 | 6 | 6 | 0.0000000000078253 |
| Sequoiadendron giganteum | chr7 | 4 | CH_sgi_586 | 5 | 7 | 0.0000000699934 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |