Functional clusters

Information

  • Type Gene Ontology
  • Description regulation of short-day photoperiodism, flowering

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Magnolia biondii Chr18 3 CH_mbi_241 5 69 0.000000367515
Oryza sativa Kitaake Chr10 3 CH_osak_449 2 2 0.000844286
Oryza sativa ssp. japonica chr10 3 CH_osa_460 2 2 0.000792184
Secale cereale GWHASIY00000004 3 CH_sce_307 3 4 0.00000205188
Sequoiadendron giganteum chr7 3 CH_sgi_402 4 5 0.00000000021849
Magnolia biondii Chr18 4 CH_mbi_241 5 69 0.000000367515
Oryza sativa Kitaake Chr10 4 CH_osak_449 2 2 0.000844286
Oryza sativa ssp. japonica chr10 4 CH_osa_460 2 2 0.000792184
Secale cereale GWHASIY00000004 4 CH_sce_307 3 4 0.00000205188
Sequoiadendron giganteum chr7 4 CH_sgi_402 4 5 0.00000000021849

Available child term results

Ontology identifier Description Number of clusters
GO:0048576 positive regulation of short-day photoperiodism, flowering 2
GO:0048577 negative regulation of short-day photoperiodism, flowering 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001