Functional clusters
Information
- Type Gene Ontology
- Description L-arabinose metabolic process
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Allium sativum | chr5 | 3 | CH_asa_139 | 6 | 31 | 0.00000000192445 |
| Allium sativum | chr5 | 3 | CH_asa_255 | 5 | 28 | 0.00000045751 |
| Allium sativum | chr8 | 3 | CH_asa_67 | 6 | 11 | 0.00000000000121931 |
| Cenchrus purpureus | GWHAORA00000009 | 3 | CH_cpu_119 | 5 | 7 | 0.00000000000167211 |
| Chlamydomonas reinhardtii | chromosome_3 | 3 | CH_cre_60 | 2 | 2 | 0.000113733 |
| Digitaria exilis | Dexi_CM05836_chr04A | 3 | CH_dex_620 | 3 | 12 | 0.000489153 |
| Eragrostis curvula | 2 | 3 | CH_ecu_495 | 3 | 8 | 0.00000706842 |
| Magnolia biondii | Chr01 | 3 | CH_mbi_606 | 2 | 3 | 0.000437077 |
| Oryza sativa ssp. indica | Chr12 | 3 | CH_osaindica_194 | 3 | 5 | 0.00000660318 |
| Oryza sativa ssp. indica | Chr11 | 3 | CH_osaindica_238 | 3 | 8 | 0.0000369578 |
| Oryza sativa Kitaake | Chr11 | 3 | CH_osak_248 | 3 | 6 | 0.0000113994 |
| Oryza sativa Kitaake | Chr12 | 3 | CH_osak_255 | 3 | 7 | 0.0000199454 |
| Oryza sativa ssp. japonica | chr12 | 3 | CH_osa_224 | 3 | 7 | 0.00000819616 |
| Oropetium thomaeum | Chromosome_2 | 3 | CH_oth_77 | 3 | 5 | 0.00000425519 |
| Sequoiadendron giganteum | chr9 | 3 | CH_sgi_633 | 3 | 4 | 0.000000142385 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00067.1 | 3 | CH_zjn_237 | 2 | 2 | 0.000555144 |
| Allium sativum | chr5 | 4 | CH_asa_139 | 6 | 31 | 0.00000000192445 |
| Allium sativum | chr5 | 4 | CH_asa_255 | 5 | 28 | 0.00000045751 |
| Allium sativum | chr8 | 4 | CH_asa_67 | 6 | 11 | 0.00000000000121931 |
| Cenchrus purpureus | GWHAORA00000009 | 4 | CH_cpu_119 | 5 | 7 | 0.00000000000167211 |
| Chlamydomonas reinhardtii | chromosome_3 | 4 | CH_cre_60 | 2 | 2 | 0.000113733 |
| Digitaria exilis | Dexi_CM05836_chr04A | 4 | CH_dex_620 | 3 | 12 | 0.000489153 |
| Eragrostis curvula | 2 | 4 | CH_ecu_495 | 3 | 8 | 0.00000706842 |
| Magnolia biondii | Chr01 | 4 | CH_mbi_606 | 2 | 3 | 0.000437077 |
| Oryza sativa ssp. indica | Chr12 | 4 | CH_osaindica_194 | 3 | 5 | 0.00000660318 |
| Oryza sativa ssp. indica | Chr11 | 4 | CH_osaindica_238 | 3 | 8 | 0.0000369578 |
| Oryza sativa Kitaake | Chr11 | 4 | CH_osak_248 | 3 | 6 | 0.0000113994 |
| Oryza sativa Kitaake | Chr12 | 4 | CH_osak_255 | 3 | 7 | 0.0000199454 |
| Oryza sativa ssp. japonica | chr12 | 4 | CH_osa_224 | 3 | 7 | 0.00000819616 |
| Oropetium thomaeum | Chromosome_2 | 4 | CH_oth_77 | 3 | 5 | 0.00000425519 |
| Sequoiadendron giganteum | chr9 | 4 | CH_sgi_633 | 3 | 4 | 0.000000142385 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00067.1 | 4 | CH_zjn_237 | 2 | 2 | 0.000555144 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |