Functional clusters
Information
- Type Gene Ontology
- Description acyl-[acyl-carrier-protein] desaturase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Allium sativum | chr6 | 3 | CH_asa_284 | 3 | 3 | 0.00000102503 |
| Eragrostis curvula | Contig30 | 3 | CH_ecu_869 | 3 | 29 | 0.000985662 |
| Musa acuminata | chr05 | 3 | CH_mac_72 | 3 | 3 | 0.000000581112 |
| Phyllostachys edulis | hic_scaffold_23 | 3 | CH_ped_269 | 3 | 4 | 0.0000201551 |
| Phyllostachys edulis | hic_scaffold_13 | 3 | CH_ped_8 | 10 | 13 | 1.23049e-27 |
| Populus trichocarpa | Chr10 | 3 | CH_ptr_485 | 2 | 2 | 0.000867002 |
| Secale cereale | GWHASIY00000002 | 3 | CH_sce_24 | 7 | 8 | 4.35022e-19 |
| Solanum lycopersicum | SL4.0ch06 | 3 | CH_sly_95 | 4 | 5 | 0.000000000382137 |
| Selaginella moellendorffii | scaffold_37 | 3 | CH_smo_6 | 6 | 6 | 2.74129e-16 |
| Triticum aestivum | Chr5A | 3 | CH_tae_1293 | 3 | 11 | 0.000471716 |
| Triticum aestivum | Chr2A | 3 | CH_tae_754 | 3 | 3 | 0.00000286392 |
| Triticum aestivum | Chr2D | 3 | CH_tae_755 | 3 | 3 | 0.00000286392 |
| Triticum dicoccoides | 2B | 3 | CH_tdi_158 | 4 | 6 | 0.0000000175892 |
| Triticum turgidum | chr2A | 3 | CH_ttu_339 | 3 | 3 | 0.0000019487 |
| Triticum turgidum | chr5A | 3 | CH_ttu_661 | 3 | 13 | 0.000556066 |
| Vanilla planifolia | CM028152.1 | 3 | CH_vpl_371 | 3 | 23 | 0.000809351 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00076.1 | 3 | CH_zjn_91 | 3 | 6 | 0.0000149499 |
| Allium sativum | chr6 | 4 | CH_asa_284 | 3 | 3 | 0.00000102503 |
| Eragrostis curvula | Contig30 | 4 | CH_ecu_869 | 3 | 29 | 0.000985662 |
| Musa acuminata | chr05 | 4 | CH_mac_72 | 3 | 3 | 0.000000581112 |
| Phyllostachys edulis | hic_scaffold_23 | 4 | CH_ped_269 | 3 | 4 | 0.0000201551 |
| Phyllostachys edulis | hic_scaffold_13 | 4 | CH_ped_8 | 10 | 13 | 1.23049e-27 |
| Populus trichocarpa | Chr10 | 4 | CH_ptr_485 | 2 | 2 | 0.000867002 |
| Secale cereale | GWHASIY00000002 | 4 | CH_sce_24 | 7 | 8 | 4.35022e-19 |
| Solanum lycopersicum | SL4.0ch06 | 4 | CH_sly_95 | 4 | 5 | 0.000000000382137 |
| Selaginella moellendorffii | scaffold_37 | 4 | CH_smo_6 | 6 | 6 | 2.74129e-16 |
| Triticum aestivum | Chr5A | 4 | CH_tae_1293 | 3 | 11 | 0.000471716 |
| Triticum aestivum | Chr2A | 4 | CH_tae_754 | 3 | 3 | 0.00000286392 |
| Triticum aestivum | Chr2D | 4 | CH_tae_755 | 3 | 3 | 0.00000286392 |
| Triticum dicoccoides | 2B | 4 | CH_tdi_158 | 4 | 6 | 0.0000000175892 |
| Triticum turgidum | chr2A | 4 | CH_ttu_339 | 3 | 3 | 0.0000019487 |
| Triticum turgidum | chr5A | 4 | CH_ttu_661 | 3 | 13 | 0.000556066 |
| Vanilla planifolia | CM028152.1 | 4 | CH_vpl_371 | 3 | 23 | 0.000809351 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00076.1 | 4 | CH_zjn_91 | 3 | 6 | 0.0000149499 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |