Functional clusters

Information

  • Type Gene Ontology
  • Description 'de novo' UMP biosynthetic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Allium sativum chr3 3 CH_asa_623 2 2 0.000232522
Brachypodium distachyon Bd2 3 CH_bdi_185 2 2 0.0000616675
Cenchrus purpureus GWHAORA00000009 3 CH_cpu_795 2 2 0.000309138
Lolium perenne Lp_chr3_0 3 CH_lpe_126 3 7 0.0000000542371
Miscanthus sinensis Chr06 3 CH_msi_417 2 2 0.000193193
Miscanthus sinensis Chr05 3 CH_msi_418 2 2 0.000193193
Oryza alta GWHAZTO00000001 3 CH_oal_450 2 2 0.000060454
Oryza sativa ssp. indica Chr1 3 CH_osaindica_249 2 2 0.0000516609
Oryza sativa Kitaake Chr1 3 CH_osak_280 2 2 0.0000562857
Oropetium thomaeum Chromosome_3 3 CH_oth_106 2 2 0.0000711845
Panicum hallii Chr05 3 CH_pha_243 2 2 0.0000581108
Sorghum bicolor Chr03 3 CH_sbi_255 2 2 0.0000586682
Secale cereale GWHASIY00000006 3 CH_sce_113 4 13 0.000000000202411
Setaria viridis Chr_05 3 CH_svi_292 2 2 0.0000521785
Triticum aestivum Chr3D 3 CH_tae_1361 2 4 0.000673409
Triticum dicoccoides 3A 3 CH_tdi_641 2 5 0.000890485
Zoysia japonica ssp. nagirizaki Zjn_sc00034.1 3 CH_zjn_110 2 2 0.0000370096
Allium sativum chr3 4 CH_asa_623 2 2 0.000232522
Brachypodium distachyon Bd2 4 CH_bdi_185 2 2 0.0000616675
Cenchrus purpureus GWHAORA00000009 4 CH_cpu_795 2 2 0.000309138
Lolium perenne Lp_chr3_0 4 CH_lpe_126 3 7 0.0000000542371
Miscanthus sinensis Chr06 4 CH_msi_417 2 2 0.000193193
Miscanthus sinensis Chr05 4 CH_msi_418 2 2 0.000193193
Oryza alta GWHAZTO00000001 4 CH_oal_450 2 2 0.000060454
Oryza sativa ssp. indica Chr1 4 CH_osaindica_249 2 2 0.0000516609
Oryza sativa Kitaake Chr1 4 CH_osak_280 2 2 0.0000562857
Oropetium thomaeum Chromosome_3 4 CH_oth_106 2 2 0.0000711845
Panicum hallii Chr05 4 CH_pha_243 2 2 0.0000581108
Sorghum bicolor Chr03 4 CH_sbi_255 2 2 0.0000586682
Secale cereale GWHASIY00000006 4 CH_sce_113 4 13 0.000000000202411
Setaria viridis Chr_05 4 CH_svi_292 2 2 0.0000521785
Triticum aestivum Chr3D 4 CH_tae_1361 2 4 0.000673409
Triticum dicoccoides 3A 4 CH_tdi_641 2 5 0.000890485
Zoysia japonica ssp. nagirizaki Zjn_sc00034.1 4 CH_zjn_110 2 2 0.0000370096

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001