Functional clusters

Information

  • Type Gene Ontology
  • Description DNA demethylase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Allium sativum chr2 3 CH_asa_219 4 12 0.000000117805
Allium sativum chr2 3 CH_asa_61 5 6 0.000000000000304784
Oryza brachyantha 2 3 CH_obr_187 3 13 0.0000535127
Oryza sativa ssp. indica Chr2 3 CH_osaindica_100 4 11 0.0000000286364
Oryza sativa ssp. japonica chr05 3 CH_osa_184 3 5 0.00000146402
Phyllostachys edulis hic_scaffold_20 3 CH_ped_215 3 4 0.00000219117
Solanum lycopersicum SL4.0ch04 3 CH_sly_270 3 6 0.00000867743
Saccharum spontaneum Chr4B 3 CH_ssp_526 3 7 0.0000243727
Saccharum spontaneum Chr5D 3 CH_ssp_841 3 15 0.000316475
Vanilla planifolia CM028157.1 3 CH_vpl_85 3 3 0.000000286631
Allium sativum chr2 4 CH_asa_219 4 12 0.000000117805
Allium sativum chr2 4 CH_asa_61 5 6 0.000000000000304784
Oryza brachyantha 2 4 CH_obr_187 3 13 0.0000535127
Oryza sativa ssp. indica Chr2 4 CH_osaindica_100 4 11 0.0000000286364
Oryza sativa ssp. japonica chr05 4 CH_osa_184 3 5 0.00000146402
Phyllostachys edulis hic_scaffold_20 4 CH_ped_215 3 4 0.00000219117
Solanum lycopersicum SL4.0ch04 4 CH_sly_270 3 6 0.00000867743
Saccharum spontaneum Chr4B 4 CH_ssp_526 3 7 0.0000243727
Saccharum spontaneum Chr5D 4 CH_ssp_841 3 15 0.000316475
Vanilla planifolia CM028157.1 4 CH_vpl_85 3 3 0.000000286631

Available child term results

Ontology identifier Description Number of clusters
GO:0051747 cytosine C-5 DNA demethylase activity 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001