Functional clusters
Information
- Type Gene Ontology
- Description indole-3-glycerol-phosphate lyase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Cenchrus purpureus | GWHAORA00000011 | 3 | CH_cpu_190 | 4 | 4 | 0.000000000530473 |
| Digitaria exilis | Dexi_CM05836_chr09B | 3 | CH_dex_138 | 4 | 8 | 0.000000000548587 |
| Hordeum vulgare | chr5H | 3 | CH_hvu_157 | 3 | 4 | 0.0000000988187 |
| Miscanthus sinensis | Chr01 | 3 | CH_msi_508 | 2 | 2 | 0.000482983 |
| Oryza alta | GWHAZTO00000015 | 3 | CH_oal_207 | 3 | 3 | 0.0000000730945 |
| Oryza alta | GWHAZTO00000003 | 3 | CH_oal_48 | 5 | 10 | 0.0000000000000785219 |
| Oryza sativa ssp. indica | Chr3 | 3 | CH_osaindica_62 | 4 | 8 | 0.000000000144753 |
| Oryza sativa Kitaake | Chr3 | 3 | CH_osak_75 | 4 | 5 | 0.0000000000133743 |
| Oropetium thomaeum | Chromosome_4 | 3 | CH_oth_164 | 2 | 2 | 0.000213554 |
| Phyllostachys edulis | hic_scaffold_21 | 3 | CH_ped_512 | 2 | 2 | 0.000855659 |
| Panicum hallii | Chr09 | 3 | CH_pha_51 | 4 | 4 | 0.00000000000294374 |
| Secale cereale | GWHASIY00000005 | 3 | CH_sce_27 | 7 | 11 | 1.48894e-18 |
| Selaginella moellendorffii | scaffold_19 | 3 | CH_smo_115 | 2 | 2 | 0.0000933707 |
| Saccharum spontaneum | Chr1D | 3 | CH_ssp_228 | 4 | 29 | 0.000000121757 |
| Setaria viridis | Chr_09 | 3 | CH_svi_80 | 4 | 5 | 0.0000000000319631 |
| Triticum aestivum | Chr5A | 3 | CH_tae_215 | 5 | 7 | 0.000000000000819558 |
| Triticum aestivum | Chr5D | 3 | CH_tae_216 | 5 | 7 | 0.000000000000819558 |
| Triticum aestivum | Chr5B | 3 | CH_tae_248 | 5 | 9 | 0.0000000000049158 |
| Triticum dicoccoides | 5A | 3 | CH_tdi_303 | 3 | 5 | 0.00000755796 |
| Triticum turgidum | chr5A | 3 | CH_ttu_48 | 6 | 8 | 2.32453e-16 |
| Triticum turgidum | chr5B | 3 | CH_ttu_92 | 5 | 9 | 0.00000000000557589 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00013.1 | 3 | CH_zjn_243 | 2 | 2 | 0.000555144 |
| Zea mays B73 | 1 | 3 | CH_zma_43 | 4 | 7 | 0.000000000210517 |
| Cenchrus purpureus | GWHAORA00000011 | 4 | CH_cpu_190 | 4 | 4 | 0.000000000530473 |
| Digitaria exilis | Dexi_CM05836_chr09B | 4 | CH_dex_138 | 4 | 8 | 0.000000000548587 |
| Hordeum vulgare | chr5H | 4 | CH_hvu_157 | 3 | 4 | 0.0000000988187 |
| Miscanthus sinensis | Chr01 | 4 | CH_msi_508 | 2 | 2 | 0.000482983 |
| Oryza alta | GWHAZTO00000015 | 4 | CH_oal_207 | 3 | 3 | 0.0000000730945 |
| Oryza alta | GWHAZTO00000003 | 4 | CH_oal_48 | 5 | 10 | 0.0000000000000785219 |
| Oryza sativa ssp. indica | Chr3 | 4 | CH_osaindica_62 | 4 | 8 | 0.000000000144753 |
| Oryza sativa Kitaake | Chr3 | 4 | CH_osak_75 | 4 | 5 | 0.0000000000133743 |
| Oropetium thomaeum | Chromosome_4 | 4 | CH_oth_164 | 2 | 2 | 0.000213554 |
| Phyllostachys edulis | hic_scaffold_21 | 4 | CH_ped_512 | 2 | 2 | 0.000855659 |
| Panicum hallii | Chr09 | 4 | CH_pha_51 | 4 | 4 | 0.00000000000294374 |
| Secale cereale | GWHASIY00000005 | 4 | CH_sce_27 | 7 | 11 | 1.48894e-18 |
| Selaginella moellendorffii | scaffold_19 | 4 | CH_smo_115 | 2 | 2 | 0.0000933707 |
| Saccharum spontaneum | Chr1D | 4 | CH_ssp_228 | 4 | 29 | 0.000000121757 |
| Setaria viridis | Chr_09 | 4 | CH_svi_80 | 4 | 5 | 0.0000000000319631 |
| Triticum aestivum | Chr5A | 4 | CH_tae_215 | 5 | 7 | 0.000000000000819558 |
| Triticum aestivum | Chr5D | 4 | CH_tae_216 | 5 | 7 | 0.000000000000819558 |
| Triticum aestivum | Chr5B | 4 | CH_tae_248 | 5 | 9 | 0.0000000000049158 |
| Triticum dicoccoides | 5A | 4 | CH_tdi_303 | 3 | 5 | 0.00000755796 |
| Triticum turgidum | chr5A | 4 | CH_ttu_48 | 6 | 8 | 2.32453e-16 |
| Triticum turgidum | chr5B | 4 | CH_ttu_92 | 5 | 9 | 0.00000000000557589 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00013.1 | 4 | CH_zjn_243 | 2 | 2 | 0.000555144 |
| Zea mays B73 | 1 | 4 | CH_zma_43 | 4 | 7 | 0.000000000210517 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |