Functional clusters
Information
- Type Gene Ontology
- Description oxylipin biosynthetic process
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Allium sativum | chr2 | 3 | CH_asa_166 | 4 | 4 | 0.00000000914292 |
| Aegilops tauschii | 7D | 3 | CH_ata_103 | 4 | 4 | 0.0000000294641 |
| Amborella trichopoda | AmTr_v1.0_scaffold00126 | 3 | CH_atr_32 | 6 | 10 | 0.0000000000000747469 |
| Chara braunii | BFEA01000185 | 3 | CH_cbr_162 | 3 | 17 | 0.000442054 |
| Eragrostis curvula | 5 | 3 | CH_ecu_107 | 8 | 27 | 0.0000000000000196177 |
| Eragrostis curvula | Contig8 | 3 | CH_ecu_176 | 5 | 5 | 0.0000000000207105 |
| Glycine max | Gm17 | 3 | CH_gma_128 | 4 | 4 | 0.00000000287908 |
| Glycine max | Gm14 | 3 | CH_gma_269 | 3 | 3 | 0.00000632091 |
| Glycine max | Gm07 | 3 | CH_gma_306 | 3 | 4 | 0.0000252745 |
| Magnolia biondii | Chr06 | 3 | CH_mbi_128 | 5 | 18 | 0.00000000155677 |
| Marchantia polymorpha | scaffold_106 | 3 | CH_mpo_64 | 3 | 4 | 0.0000209223 |
| Oryza brachyantha | 3 | 3 | CH_obr_291 | 3 | 7 | 0.0005467 |
| Oryza brachyantha | 6 | 3 | CH_obr_91 | 4 | 8 | 0.000000168144 |
| Phyllostachys edulis | hic_scaffold_22 | 3 | CH_ped_53 | 6 | 12 | 0.000000000000313696 |
| Populus trichocarpa | Chr17 | 3 | CH_ptr_51 | 7 | 7 | 4.58515e-18 |
| Populus trichocarpa | Chr14 | 3 | CH_ptr_55 | 7 | 8 | 3.66597e-17 |
| Allium sativum | chr2 | 4 | CH_asa_166 | 4 | 4 | 0.00000000914292 |
| Aegilops tauschii | 7D | 4 | CH_ata_103 | 4 | 4 | 0.0000000294641 |
| Amborella trichopoda | AmTr_v1.0_scaffold00126 | 4 | CH_atr_32 | 6 | 10 | 0.0000000000000747469 |
| Chara braunii | BFEA01000185 | 4 | CH_cbr_162 | 3 | 17 | 0.000442054 |
| Eragrostis curvula | 5 | 4 | CH_ecu_107 | 8 | 27 | 0.0000000000000196177 |
| Eragrostis curvula | Contig8 | 4 | CH_ecu_176 | 5 | 5 | 0.0000000000207105 |
| Glycine max | Gm17 | 4 | CH_gma_128 | 4 | 4 | 0.00000000287908 |
| Glycine max | Gm14 | 4 | CH_gma_269 | 3 | 3 | 0.00000632091 |
| Glycine max | Gm07 | 4 | CH_gma_306 | 3 | 4 | 0.0000252745 |
| Magnolia biondii | Chr06 | 4 | CH_mbi_128 | 5 | 18 | 0.00000000155677 |
| Marchantia polymorpha | scaffold_106 | 4 | CH_mpo_64 | 3 | 4 | 0.0000209223 |
| Oryza brachyantha | 3 | 4 | CH_obr_291 | 3 | 7 | 0.0005467 |
| Oryza brachyantha | 6 | 4 | CH_obr_91 | 4 | 8 | 0.000000168144 |
| Phyllostachys edulis | hic_scaffold_22 | 4 | CH_ped_53 | 6 | 12 | 0.000000000000313696 |
| Populus trichocarpa | Chr17 | 4 | CH_ptr_51 | 7 | 7 | 4.58515e-18 |
| Populus trichocarpa | Chr14 | 4 | CH_ptr_55 | 7 | 8 | 3.66597e-17 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |