Functional clusters
Information
- Type Gene Ontology
- Description nicotianamine biosynthetic process
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Allium sativum | chr1 | 3 | CH_asa_47 | 5 | 8 | 0.00000000000000568403 |
| Brachypodium distachyon | Bd1 | 3 | CH_bdi_322 | 2 | 2 | 0.000925012 |
| Hordeum vulgare | chr4H | 3 | CH_hvu_30 | 6 | 11 | 0.00000000000000343458 |
| Musa acuminata | chr11 | 3 | CH_mac_228 | 2 | 2 | 0.000340909 |
| Magnolia biondii | Chr14 | 3 | CH_mbi_264 | 3 | 8 | 0.000000792362 |
| Oryza alta | GWHAZTO00000015 | 3 | CH_oal_212 | 3 | 3 | 0.000000100505 |
| Oryza brachyantha | 3 | 3 | CH_obr_290 | 2 | 3 | 0.000537576 |
| Oryza sativa ssp. indica | Chr3 | 3 | CH_osaindica_360 | 2 | 3 | 0.000464928 |
| Oryza sativa Kitaake | Chr3 | 3 | CH_osak_353 | 2 | 2 | 0.000168857 |
| Oryza sativa ssp. japonica | chr03 | 3 | CH_osa_337 | 2 | 2 | 0.000158437 |
| Phyllostachys edulis | hic_scaffold_21 | 3 | CH_ped_101 | 4 | 4 | 0.00000000179713 |
| Phyllostachys edulis | hic_scaffold_15 | 3 | CH_ped_229 | 3 | 3 | 0.00000441043 |
| Triticum dicoccoides | 4B | 3 | CH_tdi_391 | 3 | 7 | 0.0000526977 |
| Zea mays B73 | 9 | 3 | CH_zma_20 | 6 | 16 | 0.0000000000000132123 |
| Allium sativum | chr1 | 4 | CH_asa_47 | 5 | 8 | 0.00000000000000568403 |
| Brachypodium distachyon | Bd1 | 4 | CH_bdi_322 | 2 | 2 | 0.000925012 |
| Hordeum vulgare | chr4H | 4 | CH_hvu_30 | 6 | 11 | 0.00000000000000343458 |
| Musa acuminata | chr11 | 4 | CH_mac_228 | 2 | 2 | 0.000340909 |
| Magnolia biondii | Chr14 | 4 | CH_mbi_264 | 3 | 8 | 0.000000792362 |
| Oryza alta | GWHAZTO00000015 | 4 | CH_oal_212 | 3 | 3 | 0.000000100505 |
| Oryza brachyantha | 3 | 4 | CH_obr_290 | 2 | 3 | 0.000537576 |
| Oryza sativa ssp. indica | Chr3 | 4 | CH_osaindica_360 | 2 | 3 | 0.000464928 |
| Oryza sativa Kitaake | Chr3 | 4 | CH_osak_353 | 2 | 2 | 0.000168857 |
| Oryza sativa ssp. japonica | chr03 | 4 | CH_osa_337 | 2 | 2 | 0.000158437 |
| Phyllostachys edulis | hic_scaffold_21 | 4 | CH_ped_101 | 4 | 4 | 0.00000000179713 |
| Phyllostachys edulis | hic_scaffold_15 | 4 | CH_ped_229 | 3 | 3 | 0.00000441043 |
| Triticum dicoccoides | 4B | 4 | CH_tdi_391 | 3 | 7 | 0.0000526977 |
| Zea mays B73 | 9 | 4 | CH_zma_20 | 6 | 16 | 0.0000000000000132123 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |