Functional clusters
Information
- Type Gene Ontology
- Description structural constituent of nuclear pore
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Allium sativum | chr7_2 | 3 | CH_asa_324 | 3 | 3 | 0.00000299624 |
| Allium sativum | chr1 | 3 | CH_asa_325 | 3 | 3 | 0.00000299624 |
| Ceratophyllum demersum | 9 | 3 | CH_cde_125 | 3 | 4 | 0.000122519 |
| Cenchrus purpureus | GWHAORA00000006 | 3 | CH_cpu_315 | 5 | 20 | 0.000000161561 |
| Chlamydomonas reinhardtii | chromosome_6 | 3 | CH_cre_36 | 3 | 3 | 0.00000706305 |
| Oryza alta | GWHAZTO00000001 | 3 | CH_oal_365 | 4 | 20 | 0.00000973756 |
| Sorghum bicolor | Chr01 | 3 | CH_sbi_398 | 4 | 50 | 0.000419982 |
| Sequoiadendron giganteum | HRSCAF_1 | 3 | CH_sgi_1172 | 3 | 5 | 0.000194002 |
| Sequoiadendron giganteum | chr9 | 3 | CH_sgi_513 | 4 | 4 | 0.0000000141932 |
| Sequoiadendron giganteum | chr3 | 3 | CH_sgi_514 | 4 | 4 | 0.0000000141932 |
| Sequoiadendron giganteum | chr10 | 3 | CH_sgi_587 | 4 | 5 | 0.0000000709242 |
| Solanum lycopersicum | SL4.0ch02 | 3 | CH_sly_168 | 4 | 6 | 0.000000186098 |
| Saccharum spontaneum | Chr6B | 3 | CH_ssp_533 | 3 | 3 | 0.0000263474 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00076.1 | 3 | CH_zjn_85 | 3 | 4 | 0.00000670471 |
| Zostera marina | Chr04 | 3 | CH_zosmarina_55 | 4 | 7 | 0.0000010021 |
| Allium sativum | chr7_2 | 4 | CH_asa_324 | 3 | 3 | 0.00000299624 |
| Allium sativum | chr1 | 4 | CH_asa_325 | 3 | 3 | 0.00000299624 |
| Ceratophyllum demersum | 9 | 4 | CH_cde_125 | 3 | 4 | 0.000122519 |
| Cenchrus purpureus | GWHAORA00000006 | 4 | CH_cpu_315 | 5 | 20 | 0.000000161561 |
| Chlamydomonas reinhardtii | chromosome_6 | 4 | CH_cre_36 | 3 | 3 | 0.00000706305 |
| Oryza alta | GWHAZTO00000001 | 4 | CH_oal_365 | 4 | 20 | 0.00000973756 |
| Sorghum bicolor | Chr01 | 4 | CH_sbi_398 | 4 | 50 | 0.000419982 |
| Sequoiadendron giganteum | HRSCAF_1 | 4 | CH_sgi_1172 | 3 | 5 | 0.000194002 |
| Sequoiadendron giganteum | chr9 | 4 | CH_sgi_513 | 4 | 4 | 0.0000000141932 |
| Sequoiadendron giganteum | chr3 | 4 | CH_sgi_514 | 4 | 4 | 0.0000000141932 |
| Sequoiadendron giganteum | chr10 | 4 | CH_sgi_587 | 4 | 5 | 0.0000000709242 |
| Solanum lycopersicum | SL4.0ch02 | 4 | CH_sly_168 | 4 | 6 | 0.000000186098 |
| Saccharum spontaneum | Chr6B | 4 | CH_ssp_533 | 3 | 3 | 0.0000263474 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00076.1 | 4 | CH_zjn_85 | 3 | 4 | 0.00000670471 |
| Zostera marina | Chr04 | 4 | CH_zosmarina_55 | 4 | 7 | 0.0000010021 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |