Functional clusters
Information
- Type Gene Ontology
- Description xanthophyll catabolic process
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Populus trichocarpa | Chr01 | 3 | CH_ptr_215 | 3 | 3 | 0.0000001754 |
| Spirodela polyrhiza | pseudo21 | 3 | CH_spo_92 | 3 | 5 | 0.00000311551 |
| Triticum aestivum | Chr5D | 3 | CH_tae_1008 | 3 | 11 | 0.0000588444 |
| Triticum aestivum | Chr5A | 3 | CH_tae_938 | 3 | 9 | 0.0000299636 |
| Triticum turgidum | chr5A | 3 | CH_ttu_418 | 3 | 8 | 0.0000135309 |
| Zostera marina | Chr06 | 3 | CH_zosmarina_158 | 2 | 2 | 0.000579346 |
| Populus trichocarpa | Chr01 | 4 | CH_ptr_215 | 3 | 3 | 0.0000001754 |
| Spirodela polyrhiza | pseudo21 | 4 | CH_spo_92 | 3 | 5 | 0.00000311551 |
| Triticum aestivum | Chr5D | 4 | CH_tae_1008 | 3 | 11 | 0.0000588444 |
| Triticum aestivum | Chr5A | 4 | CH_tae_938 | 3 | 9 | 0.0000299636 |
| Triticum turgidum | chr5A | 4 | CH_ttu_418 | 3 | 8 | 0.0000135309 |
| Zostera marina | Chr06 | 4 | CH_zosmarina_158 | 2 | 2 | 0.000579346 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |