Functional clusters

Information

  • Type Gene Ontology
  • Description response to lithium ion

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Calamus simplicifolius scaffold423 3 CH_calsi_182 2 2 0.0000671321
Dioscorea dumetorum contig330 3 CH_ddu_265 2 2 0.000690894
Elaeis guineensis EG5.1_Chr3 3 CH_egu_257 2 2 0.000568397
Oryza sativa ssp. japonica chr03 3 CH_osa_458 2 2 0.000792184
Sequoiadendron giganteum chr3 3 CH_sgi_67 11 33 9.50138e-26
Spirodela polyrhiza pseudo24 3 CH_spo_208 2 2 0.000611527
Zoysia japonica ssp. nagirizaki Zjn_sc00016.1 3 CH_zjn_275 2 2 0.000777202
Zea mays B104 scaffold1.4234 3 CH_zma-b104_36 2 2 0.000304785
Calamus simplicifolius scaffold423 4 CH_calsi_182 2 2 0.0000671321
Dioscorea dumetorum contig330 4 CH_ddu_265 2 2 0.000690894
Elaeis guineensis EG5.1_Chr3 4 CH_egu_257 2 2 0.000568397
Oryza sativa ssp. japonica chr03 4 CH_osa_458 2 2 0.000792184
Sequoiadendron giganteum chr3 4 CH_sgi_67 11 33 9.50138e-26
Spirodela polyrhiza pseudo24 4 CH_spo_208 2 2 0.000611527
Zoysia japonica ssp. nagirizaki Zjn_sc00016.1 4 CH_zjn_275 2 2 0.000777202
Zea mays B104 scaffold1.4234 4 CH_zma-b104_36 2 2 0.000304785

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001