Functional clusters
Information
- Type Gene Ontology
- Description vernalization response
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Allium sativum | chr2 | 3 | CH_asa_498 | 3 | 7 | 0.0000535692 |
| Hordeum vulgare | chr2H | 3 | CH_hvu_278 | 3 | 6 | 0.0000335765 |
| Lolium perenne | Lp_chr4_0 | 3 | CH_lpe_354 | 3 | 10 | 0.000285899 |
| Secale cereale | GWHASIY00000007 | 3 | CH_sce_164 | 4 | 4 | 0.0000000131314 |
| Allium sativum | chr2 | 4 | CH_asa_498 | 3 | 7 | 0.0000535692 |
| Hordeum vulgare | chr2H | 4 | CH_hvu_278 | 3 | 6 | 0.0000335765 |
| Lolium perenne | Lp_chr4_0 | 4 | CH_lpe_354 | 3 | 10 | 0.000285899 |
| Secale cereale | GWHASIY00000007 | 4 | CH_sce_164 | 4 | 4 | 0.0000000131314 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0010221 | negative regulation of vernalization response | 4 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |