Functional clusters
Information
- Type Gene Ontology
- Description response to fungus
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Allium sativum | chr8 | 3 | CH_asa_366 | 6 | 8 | 0.00000803313 |
| Hordeum vulgare | chr5H | 3 | CH_hvu_431 | 4 | 4 | 0.000632362 |
| Magnolia biondii | Chr16 | 3 | CH_mbi_586 | 9 | 41 | 0.000314704 |
| Triticum aestivum | Chr4B | 3 | CH_tae_447 | 10 | 23 | 0.000000016833 |
| Triticum aestivum | Chr2A | 3 | CH_tae_987 | 6 | 9 | 0.0000463552 |
| Allium sativum | chr8 | 4 | CH_asa_366 | 6 | 8 | 0.00000803313 |
| Hordeum vulgare | chr5H | 4 | CH_hvu_431 | 4 | 4 | 0.000632362 |
| Magnolia biondii | Chr16 | 4 | CH_mbi_586 | 9 | 41 | 0.000314704 |
| Triticum aestivum | Chr4B | 4 | CH_tae_447 | 10 | 23 | 0.000000016833 |
| Triticum aestivum | Chr2A | 4 | CH_tae_987 | 6 | 9 | 0.0000463552 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0002238 | response to molecule of fungal origin | 4 |
| GO:0009610 | response to symbiotic fungus | 2 |
| GO:0032491 | detection of molecule of fungal origin | 8 |
| GO:0050832 | defense response to fungus | 4 |
| GO:0061760 | antifungal innate immune response | 2 |
| GO:0071226 | cellular response to molecule of fungal origin | 2 |
| GO:1900150 | regulation of defense response to fungus | 18 |
| GO:1905034 | regulation of antifungal innate immune response | 12 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |