Functional clusters
Information
- Type Gene Ontology
- Description pollen development
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aegilops tauschii | 5D | 3 | CH_ata_11 | 13 | 16 | 3.09508e-20 |
| Amborella trichopoda | AmTr_v1.0_scaffold00086 | 3 | CH_atr_166 | 5 | 6 | 0.0000150544 |
| Hordeum vulgare | chr5H | 3 | CH_hvu_33 | 10 | 13 | 0.00000000000000695982 |
| Lolium perenne | Lp_chr4_0 | 3 | CH_lpe_46 | 11 | 35 | 0.0000000000020904 |
| Secale cereale | GWHASIY00000005 | 3 | CH_sce_10 | 16 | 19 | 1.15963e-24 |
| Triticum aestivum | Chr5A | 3 | CH_tae_44 | 14 | 16 | 1.65081e-22 |
| Triticum aestivum | Chr5B | 3 | CH_tae_70 | 13 | 16 | 8.9001e-20 |
| Triticum aestivum | Chr5D | 3 | CH_tae_71 | 13 | 16 | 8.9001e-20 |
| Triticum turgidum | chr5A | 3 | CH_ttu_59 | 11 | 15 | 0.00000000000000297697 |
| Triticum turgidum | chr5B | 3 | CH_ttu_6 | 16 | 18 | 1.97111e-26 |
| Aegilops tauschii | 5D | 4 | CH_ata_11 | 13 | 16 | 3.09508e-20 |
| Amborella trichopoda | AmTr_v1.0_scaffold00086 | 4 | CH_atr_166 | 5 | 6 | 0.0000150544 |
| Hordeum vulgare | chr5H | 4 | CH_hvu_33 | 10 | 13 | 0.00000000000000695982 |
| Lolium perenne | Lp_chr4_0 | 4 | CH_lpe_46 | 11 | 35 | 0.0000000000020904 |
| Secale cereale | GWHASIY00000005 | 4 | CH_sce_10 | 16 | 19 | 1.15963e-24 |
| Triticum aestivum | Chr5A | 4 | CH_tae_44 | 14 | 16 | 1.65081e-22 |
| Triticum aestivum | Chr5B | 4 | CH_tae_70 | 13 | 16 | 8.9001e-20 |
| Triticum aestivum | Chr5D | 4 | CH_tae_71 | 13 | 16 | 8.9001e-20 |
| Triticum turgidum | chr5A | 4 | CH_ttu_59 | 11 | 15 | 0.00000000000000297697 |
| Triticum turgidum | chr5B | 4 | CH_ttu_6 | 16 | 18 | 1.97111e-26 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0010152 | pollen maturation | 20 |
| GO:0010584 | pollen exine formation | 8 |
| GO:0022619 | generative cell differentiation | 6 |
| GO:0048235 | pollen sperm cell differentiation | 4 |
| GO:0055046 | microgametogenesis | 2 |
| GO:0080110 | sporopollenin biosynthetic process | 4 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |