Functional clusters
Information
- Type Gene Ontology
- Description glycoprotein metabolic process
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Musa acuminata | chr01 | 3 | CH_mac_269 | 5 | 40 | 0.00072959 |
Musa acuminata | chr01 | 4 | CH_mac_269 | 5 | 40 | 0.00072959 |
Available child term results
Ontology identifier | Description | Number of clusters |
---|---|---|
GO:0000032 | cell wall mannoprotein biosynthetic process | 2 |
GO:0006486 | protein glycosylation | 112 |
GO:0006488 | dolichol-linked oligosaccharide biosynthetic process | 2 |
GO:0006493 | protein O-linked glycosylation | 4 |
GO:0006516 | glycoprotein catabolic process | 4 |
GO:0009101 | glycoprotein biosynthetic process | 2 |
GO:0010406 | classical arabinogalactan protein metabolic process | 2 |
GO:0010409 | extensin metabolic process | 4 |
GO:0018279 | protein N-linked glycosylation via asparagine | 8 |
GO:0036066 | protein O-linked fucosylation | 6 |
GO:1904380 | endoplasmic reticulum mannose trimming | 6 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |