Functional clusters

Information

  • Type Gene Ontology
  • Description condensin complex

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Calamus simplicifolius scaffold82 3 CH_calsi_228 2 3 0.00020139
Eragrostis curvula 3 3 CH_ecu_752 2 3 0.000348941
Elaeis guineensis p5_sc00010 3 CH_egu_264 2 2 0.000568397
Magnolia biondii Chr19 3 CH_mbi_522 2 2 0.000145698
Oryza alta GWHAZTO00000018 3 CH_oal_596 2 2 0.000201513
Secale cereale GWHASIY00000002 3 CH_sce_576 2 2 0.000136587
Sequoiadendron giganteum chr3 3 CH_sgi_1321 2 2 0.000730727
Sequoiadendron giganteum chr2 3 CH_sgi_1322 2 2 0.000730727
Sequoiadendron giganteum chr11 3 CH_sgi_1323 2 2 0.000730727
Saccharum spontaneum Chr8B 3 CH_ssp_814 2 2 0.000238589
Vanilla planifolia CM028151.1 3 CH_vpl_278 2 2 0.000221664
Zoysia japonica ssp. nagirizaki Zjn_sc00001.1 3 CH_zjn_258 2 3 0.000666144
Calamus simplicifolius scaffold82 4 CH_calsi_228 2 3 0.00020139
Eragrostis curvula 3 4 CH_ecu_752 2 3 0.000348941
Elaeis guineensis p5_sc00010 4 CH_egu_264 2 2 0.000568397
Magnolia biondii Chr19 4 CH_mbi_522 2 2 0.000145698
Oryza alta GWHAZTO00000018 4 CH_oal_596 2 2 0.000201513
Secale cereale GWHASIY00000002 4 CH_sce_576 2 2 0.000136587
Sequoiadendron giganteum chr3 4 CH_sgi_1321 2 2 0.000730727
Sequoiadendron giganteum chr2 4 CH_sgi_1322 2 2 0.000730727
Sequoiadendron giganteum chr11 4 CH_sgi_1323 2 2 0.000730727
Saccharum spontaneum Chr8B 4 CH_ssp_814 2 2 0.000238589
Vanilla planifolia CM028151.1 4 CH_vpl_278 2 2 0.000221664
Zoysia japonica ssp. nagirizaki Zjn_sc00001.1 4 CH_zjn_258 2 3 0.000666144

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001