Functional clusters
Information
- Type Gene Ontology
- Description exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Allium sativum | chr8 | 3 | CH_asa_56 | 5 | 5 | 0.0000000000000739003 |
| Glycine max | Gm05 | 3 | CH_gma_593 | 3 | 37 | 0.000937414 |
| Oryza brachyantha | 7 | 3 | CH_obr_238 | 2 | 4 | 0.000179201 |
| Sequoiadendron giganteum | chr6 | 3 | CH_sgi_558 | 3 | 3 | 0.0000000355983 |
| Vanilla planifolia | CM028155.1 | 3 | CH_vpl_258 | 2 | 2 | 0.000221664 |
| Zea mays B104 | scaffold7.2220 | 3 | CH_zma-b104_44 | 2 | 2 | 0.000914355 |
| Allium sativum | chr8 | 4 | CH_asa_56 | 5 | 5 | 0.0000000000000739003 |
| Glycine max | Gm05 | 4 | CH_gma_593 | 3 | 37 | 0.000937414 |
| Oryza brachyantha | 7 | 4 | CH_obr_238 | 2 | 4 | 0.000179201 |
| Sequoiadendron giganteum | chr6 | 4 | CH_sgi_558 | 3 | 3 | 0.0000000355983 |
| Vanilla planifolia | CM028155.1 | 4 | CH_vpl_258 | 2 | 2 | 0.000221664 |
| Zea mays B104 | scaffold7.2220 | 4 | CH_zma-b104_44 | 2 | 2 | 0.000914355 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |