Functional clusters
Information
- Type Gene Ontology
- Description negative regulation of transcription by RNA polymerase II
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amborella trichopoda | AmTr_v1.0_scaffold00057 | 3 | CH_atr_145 | 3 | 5 | 0.00000529931 |
| Populus trichocarpa | Chr08 | 3 | CH_ptr_272 | 3 | 3 | 0.00000340777 |
| Solanum lycopersicum | SL4.0ch10 | 3 | CH_sly_126 | 4 | 4 | 0.00000000644632 |
| Spirodela polyrhiza | pseudo6 | 3 | CH_spo_94 | 3 | 3 | 0.00000342819 |
| Amborella trichopoda | AmTr_v1.0_scaffold00057 | 4 | CH_atr_145 | 3 | 5 | 0.00000529931 |
| Populus trichocarpa | Chr08 | 4 | CH_ptr_272 | 3 | 3 | 0.00000340777 |
| Solanum lycopersicum | SL4.0ch10 | 4 | CH_sly_126 | 4 | 4 | 0.00000000644632 |
| Spirodela polyrhiza | pseudo6 | 4 | CH_spo_94 | 3 | 3 | 0.00000342819 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |