Functional clusters

Information

  • Type MapMan
  • Description Secondary metabolism.phenolics.flavonoid biosynthesis.dihydroflavonols.flavanone 3-hydroxylase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Allium sativum chr2 1 CH_asa_528 2 2 0.000116261
Glycine max Gm02 1 CH_gma_449 2 2 0.000227734
Miscanthus sinensis Chr11 1 CH_msi_162 3 5 0.000000155505
Populus trichocarpa Chr05 1 CH_ptr_309 2 2 0.0000578001
Sorghum bicolor Chr06 1 CH_sbi_284 2 2 0.0000586682
Sequoiadendron giganteum chr1 1 CH_sgi_1365 2 2 0.000730727
Zostera marina Chr06 1 CH_zosmarina_4 6 10 2.77644e-16
Allium sativum chr2 2 CH_asa_528 2 2 0.000116261
Glycine max Gm02 2 CH_gma_449 2 2 0.000227734
Miscanthus sinensis Chr11 2 CH_msi_162 3 5 0.000000155505
Populus trichocarpa Chr05 2 CH_ptr_309 2 2 0.0000578001
Sorghum bicolor Chr06 2 CH_sbi_284 2 2 0.0000586682
Sequoiadendron giganteum chr1 2 CH_sgi_1365 2 2 0.000730727
Zostera marina Chr06 2 CH_zosmarina_4 6 10 2.77644e-16

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001