Functional clusters

Information

  • Type MapMan
  • Description Secondary metabolism.phenolics.flavonoid biosynthesis.flavanones.chalcone isomerase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Allium sativum chr2 1 CH_asa_527 2 2 0.000116261
Arabidopsis thaliana Chr5 1 CH_ath_312 2 2 0.000171895
Amborella trichopoda AmTr_v1.0_scaffold00034 1 CH_atr_295 2 2 0.000476644
Cenchrus purpureus GWHAORA00000003 1 CH_cpu_870 3 36 0.000857357
Glycine max Gm20 1 CH_gma_148 3 3 0.0000000432199
Secale cereale GWHASIY00000005 1 CH_sce_693 2 4 0.000273162
Solanum lycopersicum SL4.0ch05 1 CH_sly_417 2 2 0.000176082
Saccharum spontaneum Chr2C 1 CH_ssp_1190 2 2 0.00066805
Allium sativum chr2 2 CH_asa_527 2 2 0.000116261
Arabidopsis thaliana Chr5 2 CH_ath_312 2 2 0.000171895
Amborella trichopoda AmTr_v1.0_scaffold00034 2 CH_atr_295 2 2 0.000476644
Cenchrus purpureus GWHAORA00000003 2 CH_cpu_870 3 36 0.000857357
Glycine max Gm20 2 CH_gma_148 3 3 0.0000000432199
Secale cereale GWHASIY00000005 2 CH_sce_693 2 4 0.000273162
Solanum lycopersicum SL4.0ch05 2 CH_sly_417 2 2 0.000176082
Saccharum spontaneum Chr2C 2 CH_ssp_1190 2 2 0.00066805

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001