Functional clusters

Information

  • Type MapMan
  • Description Secondary metabolism.terpenoids.carotenoid biosynthesis.apocarotenoids.zaxinone synthase (ZAS)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_344 1 CH_aag_23 3 3 0.0000000386485
Amborella trichopoda AmTr_v1.0_scaffold00056 1 CH_atr_189 2 2 0.0000794407
Glycine max Gm04 1 CH_gma_447 2 2 0.000227734
Glycine max Gm06 1 CH_gma_448 2 2 0.000227734
Magnolia biondii Chr04 1 CH_mbi_335 2 2 0.0000485661
Marchantia polymorpha scaffold_12 1 CH_mpo_123 2 2 0.000662654
Miscanthus sinensis Chr19 1 CH_msi_548 2 2 0.000482983
Oryza alta GWHAZTO00000008 1 CH_oal_284 3 13 0.00000609484
Oryza sativa ssp. indica Chr8 1 CH_osaindica_128 3 5 0.000000400286
Panicum hallii Chr04 1 CH_pha_385 2 3 0.000522972
Populus trichocarpa Chr18 1 CH_ptr_177 3 3 0.000000100229
Populus trichocarpa Chr06 1 CH_ptr_178 3 3 0.000000100229
Sorghum bicolor Chr02 1 CH_sbi_413 2 3 0.000527988
Anthoceros agrestis Sc2ySwM_344 2 CH_aag_23 3 3 0.0000000386485
Amborella trichopoda AmTr_v1.0_scaffold00056 2 CH_atr_189 2 2 0.0000794407
Glycine max Gm04 2 CH_gma_447 2 2 0.000227734
Glycine max Gm06 2 CH_gma_448 2 2 0.000227734
Magnolia biondii Chr04 2 CH_mbi_335 2 2 0.0000485661
Marchantia polymorpha scaffold_12 2 CH_mpo_123 2 2 0.000662654
Miscanthus sinensis Chr19 2 CH_msi_548 2 2 0.000482983
Oryza alta GWHAZTO00000008 2 CH_oal_284 3 13 0.00000609484
Oryza sativa ssp. indica Chr8 2 CH_osaindica_128 3 5 0.000000400286
Panicum hallii Chr04 2 CH_pha_385 2 3 0.000522972
Populus trichocarpa Chr18 2 CH_ptr_177 3 3 0.000000100229
Populus trichocarpa Chr06 2 CH_ptr_178 3 3 0.000000100229
Sorghum bicolor Chr02 2 CH_sbi_413 2 3 0.000527988

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001