Functional clusters

Information

  • Type MapMan
  • Description Secondary metabolism.terpenoids.carotenoid biosynthesis.xanthophylls.carotenoid hydroxylase activities.carotenoid beta-ring hydroxylase (BCH)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Sequoiadendron giganteum chr7 1 CH_sgi_482 3 3 0.0000000355983
Saccharum spontaneum Chr5A 1 CH_ssp_1116 2 2 0.000501038
Zoysia japonica ssp. nagirizaki Zjn_sc00003.1 1 CH_zjn_166 2 2 0.000221971
Sequoiadendron giganteum chr7 2 CH_sgi_482 3 3 0.0000000355983
Saccharum spontaneum Chr5A 2 CH_ssp_1116 2 2 0.000501038
Zoysia japonica ssp. nagirizaki Zjn_sc00003.1 2 CH_zjn_166 2 2 0.000221971

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001